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WormBase Tree Display for Gene: WBGene00019329

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Name Class

WBGene00019329SMapS_parentSequenceK02F3
IdentityVersion2
NameCGC_nameceeh-1
Sequence_nameK02F3.6
Molecular_nameK02F3.6
K02F3.6.1
CE28941
K02F3.6.2
Other_nameCELE_K02F3.6Accession_evidenceNDBBX284603
Public_nameceeh-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
222 Feb 2008 11:22:27WBPerson2970Name_changeCGC_nameceeh-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classceeh
Allele (109)
StrainWBStrain00032998
RNASeq_FPKM (74)
GO_annotation00009611
00009612
00009613
00009614
00009615
00009616
00009617
00009618
00009619
00009620
00124205
OrthologWBGene00035503Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00071187Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00149758Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00138077Caenorhabditis japonicaFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00122964Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00093311Pristionchus pacificusFrom_analysisOMA
WormBase-Compara
CBOVI.g5427Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g7215Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g7216Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g10454Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13738Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3606Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g10736Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g960Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3759Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4428Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g6809Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00691.g13481Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-ceeh-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g16691Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02662.g27439Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_05953.g35837Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19036Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_011930Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05584Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4938Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30332910Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g6823Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00105173Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111532Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272580Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281400Pristionchus pacificusFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-080227-1Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:23760Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:23758Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1919182Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2686228Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1307206Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Paralog (14)
Structured_descriptionConcise_descriptionceeh-1 encodes a soluble epoxide hydrolase (sEH) orthologous to human ABHD7 and ABHD9; recombinant CEEH-1 is biochemically active in vitro on epoxyeicosatrienoic acids and leukotoxins (EpOMEs); conversely, CEEH-1 is inhibited by urea-based antagonists of mammalian sEH that elevate EpOME levels when fed to C. elegans; perhaps because of genetic redundancy with its paralog CEEH-2, CEEH-1 has no obvious function in mass RNAi assays.Paper_evidenceWBPaper00031511
Curator_confirmedWBPerson567
Date_last_updated02 Mar 2008 00:00:00
Automated_descriptionEnables epoxide hydrolase activity. Involved in cellular lipid metabolic process. Predicted to be located in membrane. Is an ortholog of human EPHX3 (epoxide hydrolase 3) and EPHX4 (epoxide hydrolase 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK02F3.6
Corresponding_transcriptK02F3.6.1
K02F3.6.2
Other_sequence (25)
Associated_featureWBsf650818
WBsf666541
WBsf991166
WBsf991167
WBsf1014140
WBsf1014141
WBsf226131
Experimental_infoRNAi_resultWBRNAi00016487Inferred_automaticallyRNAi_primary
WBRNAi00049753Inferred_automaticallyRNAi_primary
WBRNAi00006517Inferred_automaticallyRNAi_primary
Expr_patternExpr1010341
Expr1038354
Expr1153469
Expr2009855
Expr2028095
Drives_constructWBCnstr00025912
Construct_productWBCnstr00025912
Microarray_results (19)
Expression_cluster (155)
InteractionWBInteraction000358659
Map_infoMapIIIPosition-25.7742Error0.001143
PositivePositive_cloneK02F3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031511
WBPaper00038491
WBPaper00042257
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene