WormBase Tree Display for Gene: WBGene00019272

WBGene00019272 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 1
    Name: Sequence_name: H42K12.3
      Molecular_name: H42K12.3
        H42K12.3.1
        CE11614
        H42K12.3.2
        H42K12.3.3
      Other_name: CELE_H42K12.3 Accession_evidence: NDB BX284606
      Public_name: H42K12.3
    DB_info: Database: AceView gene XB933
        WormQTL gene WBGene00019272
        WormFlux gene WBGene00019272
        NDB locus_tag CELE_H42K12.3
        NCBI gene 180474
        RefSeq protein NM_075839.9
        TREEFAM TREEFAM_ID TF326431
        TrEMBL UniProtAcc O17347
        UniProt_GCRP UniProtAcc O17347
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (81)
    RNASeq_FPKM (74)
    Ortholog (30)
    Paralog (15)
    Structured_description: Automated_description: Enriched in hypodermis; sensory neurons; and ventral cord blast cell based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-nine chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Thrombospondin type-1 (TSP1) repeat superfamily; PAN domain; and PAN/Apple domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H42K12.3
    Corresponding_transcript: H42K12.3.1
      H42K12.3.2
      H42K12.3.3
    Other_sequence (21)
    Associated_feature: WBsf647822
      WBsf647823
      WBsf647824
      WBsf662468
      WBsf718503
      WBsf1004010
      WBsf1022252
      WBsf235325
  Experimental_info: RNAi_result: WBRNAi00016354 Inferred_automatically: RNAi_primary
      WBRNAi00049560 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018033
      Expr1038325
      Expr1153287
      Expr2004618
      Expr2022844
    Drives_construct: WBCnstr00025952
    Construct_product: WBCnstr00025952
    Microarray_results (21)
    Expression_cluster (300)
    Interaction: WBInteraction000103139
      WBInteraction000103459
      WBInteraction000103762
      WBInteraction000104332
      WBInteraction000106594
      WBInteraction000109425
      WBInteraction000109492
      WBInteraction000109658
      WBInteraction000109783
      WBInteraction000109860
      WBInteraction000111795
      WBInteraction000112813
      WBInteraction000112956
      WBInteraction000114646
      WBInteraction000118727
      WBInteraction000119287
      WBInteraction000119300
      WBInteraction000119723
      WBInteraction000120388
      WBInteraction000121443
      WBInteraction000124748
      WBInteraction000125276
      WBInteraction000126025
      WBInteraction000127558
      WBInteraction000127568
      WBInteraction000135389
      WBInteraction000137092
      WBInteraction000137609
      WBInteraction000137610
      WBInteraction000138739
      WBInteraction000140232
      WBInteraction000141488
      WBInteraction000142146
      WBInteraction000143651
      WBInteraction000144022
      WBInteraction000144889
      WBInteraction000145147
      WBInteraction000145246
      WBInteraction000147738
      WBInteraction000147853
      WBInteraction000150340
      WBInteraction000151441
      WBInteraction000157758
      WBInteraction000159663
      WBInteraction000162845
      WBInteraction000163785
      WBInteraction000165124
      WBInteraction000167914
      WBInteraction000170623
      WBInteraction000172001
      WBInteraction000174545
      WBInteraction000174684
      WBInteraction000176001
      WBInteraction000176911
      WBInteraction000177145
      WBInteraction000177601
      WBInteraction000178989
      WBInteraction000179235
      WBInteraction000180283
      WBInteraction000180831
      WBInteraction000182464
      WBInteraction000183755
      WBInteraction000185479
      WBInteraction000186953
      WBInteraction000187187
      WBInteraction000187553
      WBInteraction000188999
      WBInteraction000191130
      WBInteraction000192948
      WBInteraction000194935
      WBInteraction000197192
      WBInteraction000197652
      WBInteraction000198706
      WBInteraction000199015
      WBInteraction000201899
      WBInteraction000205046
      WBInteraction000205593
      WBInteraction000207068
      WBInteraction000211427
      WBInteraction000214130
      WBInteraction000215537
      WBInteraction000219519
      WBInteraction000219561
      WBInteraction000220574
      WBInteraction000227714
      WBInteraction000229136
      WBInteraction000229280
      WBInteraction000235028
      WBInteraction000237293
      WBInteraction000237639
      WBInteraction000242665
      WBInteraction000250607
      WBInteraction000257037
      WBInteraction000259012
      WBInteraction000261123
      WBInteraction000263807
      WBInteraction000268061
      WBInteraction000269207
      WBInteraction000269348
      WBInteraction000270599
      WBInteraction000273417
      WBInteraction000273771
      WBInteraction000276121
      WBInteraction000280359
      WBInteraction000280571
      WBInteraction000281870
      WBInteraction000286729
      WBInteraction000291990
      WBInteraction000296314
      WBInteraction000296826
      WBInteraction000298351
      WBInteraction000305403
      WBInteraction000306148
      WBInteraction000306398
      WBInteraction000306954
      WBInteraction000313302
      WBInteraction000315280
      WBInteraction000317022
      WBInteraction000317445
      WBInteraction000327239
      WBInteraction000330988
      WBInteraction000337961
      WBInteraction000341537
      WBInteraction000342792
      WBInteraction000343242
      WBInteraction000345356
      WBInteraction000353269
      WBInteraction000357975
      WBInteraction000362799
      WBInteraction000371421
      WBInteraction000376812
      WBInteraction000382500
      WBInteraction000386560
      WBInteraction000396551
      WBInteraction000397130
      WBInteraction000403420
      WBInteraction000406971
      WBInteraction000420290
      WBInteraction000436580
      WBInteraction000436942
      WBInteraction000442124
      WBInteraction000442656
      WBInteraction000449395
      WBInteraction000452976
      WBInteraction000459419
      WBInteraction000459518
      WBInteraction000460952
  Map_info: Positive: Positive_clone: H42K12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -18.4159
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene