WormBase Tree Display for Gene: WBGene00019268

WBGene00019268 SMap: S_parent: Sequence: H41C03
  Identity: Version: 1
    Name: Sequence_name: H41C03.1
      Molecular_name: H41C03.1
        H41C03.1.1
        CE19507
      Other_name: CELE_H41C03.1 Accession_evidence: NDB BX284602
      Public_name: H41C03.1
    DB_info: Database: AceView gene 2G147
        WormQTL gene WBGene00019268
        WormFlux gene WBGene00019268
        NDB locus_tag CELE_H41C03.1
        Panther gene CAEEL|WormBase=WBGene00019268|UniProtKB=O76636
          family PTHR47159
        NCBI gene 173994
        RefSeq protein NM_062767.5
        TREEFAM TREEFAM_ID TF313988
        TrEMBL UniProtAcc O76636
        UniProt_GCRP UniProtAcc O76636
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (72)
    RNASeq_FPKM (74)
    Ortholog: WBGene00155380 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00155715 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00025564 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00057267 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00138411 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g6272 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7529 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5525 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15196 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12309 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22094 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17303 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g17951 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g11056 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g12901 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7037 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00258.g8013 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-H41C03.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19433 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00105.g4422 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04426 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006140 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09235 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_20118200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4634 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00304710 Pristionchus pacificus From_analysis: WormBase-Compara
    Paralog (11)
    Structured_description: Automated_description: Enriched in several structures, including ABarpaapap; ABarpaappa; anterior hypodermis; mechanosensory neurons; and rectal epithelial cell based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including bisphenol A; TPEN; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: CRAL/TRIO domain; CRAL-TRIO lipid binding domain; CRAL/TRIO, N-terminal domain superfamily; and CRAL-TRIO lipid binding domain superfamily. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H41C03.1
    Corresponding_transcript: H41C03.1.1
    Other_sequence (60)
    Associated_feature: WBsf654868
      WBsf1012269
      WBsf221353
      WBsf221354
  Experimental_info: RNAi_result (13)
    Expr_pattern (5)
    Drives_construct: WBCnstr00025955
    Construct_product: WBCnstr00025955
    Microarray_results (19)
    Expression_cluster (152)
    Interaction: WBInteraction000276408
      WBInteraction000310119
      WBInteraction000357866
      WBInteraction000406747
      WBInteraction000454178
      WBInteraction000552687
      WBInteraction000553652
      WBInteraction000568093
  Map_info: Positive: Positive_clone: H41C03 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -0.863782
  Reference: WBPaper00055090
  Method: Gene