WormBase Tree Display for Gene: WBGene00019250
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| WBGene00019250 | SMap | S_parent | Sequence | H28G03 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | H28G03.2 | |||||||
| Molecular_name | H28G03.2a | ||||||||
| H28G03.2a.1 | |||||||||
| CE29419 | |||||||||
| H28G03.2b | |||||||||
| CE31191 | |||||||||
| H28G03.2a.2 | |||||||||
| H28G03.2b.1 | |||||||||
| Other_name | CELE_H28G03.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | H28G03.2 | ||||||||
| DB_info | Database | AceView | gene | XF833 | |||||
| WormQTL | gene | WBGene00019250 | |||||||
| WormFlux | gene | WBGene00019250 | |||||||
| NDB | locus_tag | CELE_H28G03.2 | |||||||
| NCBI | gene | 180790 | |||||||
| RefSeq | protein | NM_171679.5 | |||||||
| NM_171678.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF342675 | |||||||
| TrEMBL | UniProtAcc | H2L0D3 | |||||||
| H2L0D2 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L0D2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (195) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX052 | ||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00012245 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00012306 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalappaap; ABalpppapa; ABpraaaapa; germ line; and neurons based on microarray; RNA-seq; tiling array; and single-cell RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and npr-1 based on microarray; RNA-seq; and proteomic studies. Is affected by four chemicals including silicon dioxide nanoparticle; Quercetin; and single-walled carbon nanotube based on microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H28G03.2a | |||||||
| H28G03.2b | |||||||||
| Corresponding_CDS_history | H28G03.2c:wp275 | ||||||||
| Corresponding_transcript | H28G03.2a.1 | ||||||||
| H28G03.2a.2 | |||||||||
| H28G03.2b.1 | |||||||||
| Other_sequence | CJC17567_1 | ||||||||
| Associated_feature (37) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00049513 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016332 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022158 | ||||||||
| Expr1038317 | |||||||||
| Expr1153234 | |||||||||
| Expr2004588 | |||||||||
| Expr2022813 | |||||||||
| Drives_construct | WBCnstr00025966 | ||||||||
| Construct_product | WBCnstr00025966 | ||||||||
| Microarray_results (39) | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction (46) | |||||||||
| Map_info | Positive | Positive_clone | H28G03 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -6.01426 | |||||||
| Reference | WBPaper00064201 | ||||||||
| Method | Gene |
