WormBase Tree Display for Gene: WBGene00019232
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| WBGene00019232 | SMap | S_parent | Sequence | H23N18 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ugt-13 | Person_evidence | WBPerson1208 | |||||
| WBPerson655 | |||||||||
| Sequence_name | H23N18.1 | ||||||||
| Molecular_name | H23N18.1 | ||||||||
| H23N18.1.1 | |||||||||
| CE35331 | |||||||||
| Other_name | CELE_H23N18.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ugt-13 | ||||||||
| DB_info | Database | AceView | gene | 5F385 | |||||
| WormQTL | gene | WBGene00019232 | |||||||
| WormFlux | gene | WBGene00019232 | |||||||
| NDB | locus_tag | CELE_H23N18.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019232|UniProtKB=Q9TXZ6 | |||||||
| family | PTHR48043 | ||||||||
| NCBI | gene | 186766 | |||||||
| RefSeq | protein | NM_071916.8 | |||||||
| TREEFAM | TREEFAM_ID | TF352368 | |||||||
| TrEMBL | UniProtAcc | Q9TXZ6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TXZ6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Jun 2005 11:17:00 | WBPerson2970 | Name_change | CGC_name | ugt-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ugt | ||||||||
| Allele (50) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097339 | ||||||||
| 00097340 | |||||||||
| 00097341 | |||||||||
| 00097342 | |||||||||
| 00097343 | |||||||||
| 00097344 | |||||||||
| 00124131 | |||||||||
| Ortholog (91) | |||||||||
| Paralog (74) | |||||||||
| Structured_description | Automated_description | Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of human UGT3A1 (UDP glycosyltransferase family 3 member A1); UGT3A2 (UDP glycosyltransferase family 3 member A2); and UGT8 (UDP glycosyltransferase 8). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H23N18.1 | |||||||
| Corresponding_CDS_history | H23N18.1:wp107 | ||||||||
| Corresponding_transcript | H23N18.1.1 | ||||||||
| Other_sequence (54) | |||||||||
| Associated_feature | WBsf646785 | ||||||||
| WBsf231712 | |||||||||
| WBsf231713 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033744 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016302 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049466 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020564 | ||||||||
| Expr1038305 | |||||||||
| Expr1153192 | |||||||||
| Expr2017757 | |||||||||
| Expr2035896 | |||||||||
| Drives_construct | WBCnstr00005973 | ||||||||
| WBCnstr00007123 | |||||||||
| Microarray_results | SMD_H23N18.1 | ||||||||
| 188934_at | |||||||||
| A_12_P111741 | |||||||||
| A_12_P179400 | |||||||||
| Aff_H23N18.D | |||||||||
| GPL13394_WBGene00019232 | |||||||||
| GPL13914_H23N18.1 | |||||||||
| GPL14144_H23N18.1_1226-1285_0.906_26_A | |||||||||
| GPL14144_H23N18.1_1230-1289_0.888_43_C | |||||||||
| GPL14144_H23N18.1_1234-1293_0.898_35_B | |||||||||
| GPL19516_CGZ0026569 | |||||||||
| GPL21109_H23N18.1 | |||||||||
| GPL3518_CE20983 | |||||||||
| GPL8304_CE_WBGene00019232_A | |||||||||
| GPL8673_H23N18_1P00350 | |||||||||
| GPL8673_H23N18_1P00491 | |||||||||
| GPL8673_H23N18_1P01427 | |||||||||
| GPL9450_H23N18.1 | |||||||||
| cea2.i.40699 | |||||||||
| Expression_cluster (303) | |||||||||
| Interaction | WBInteraction000144808 | ||||||||
| WBInteraction000344751 | |||||||||
| WBInteraction000504274 | |||||||||
| Map_info | Map | V | Position | -3.71178 | Error | 0.002867 | |||
| Positive | Positive_clone | H23N18 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035969 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00038729 | |||||||||
| WBPaper00044018 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055433 | |||||||||
| WBPaper00057567 | |||||||||
| WBPaper00062515 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
