WormBase Tree Display for Gene: WBGene00019148

WBGene00019148 SMap: S_parent: Sequence: H03E18
  Identity: Version: 1
    Name: Sequence_name: H03E18.1
      Molecular_name: H03E18.1
        H03E18.1.1
        CE37653
      Other_name: CELE_H03E18.1 Accession_evidence: NDB BX284606
      Public_name: H03E18.1
    DB_info: Database: AceView gene XJ131
        WormQTL gene WBGene00019148
        WormFlux gene WBGene00019148
        NDB locus_tag CELE_H03E18.1
        Panther gene CAEEL|WormBase=WBGene00019148|UniProtKB=Q94248
          family PTHR35193
        NCBI gene 181103
        RefSeq protein NM_077042.7
        TREEFAM TREEFAM_ID TF350127
        TrEMBL UniProtAcc Q94248
        UniProt_GCRP UniProtAcc Q94248
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (106)
    RNASeq_FPKM (74)
    Ortholog: WBGene00041266 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065513 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00191739 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00129956 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00231926 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g3183 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7881 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g708 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9030 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g5044 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g19054 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16888 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16459 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16274 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2612 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00282.g8432 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-H03E18.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g11003 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00097.g4187 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_02030 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025289 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04324 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13911 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0166000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19589 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00238901 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00282032 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00256713 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (15)
    Structured_description: Automated_description: Enriched in epithelial cell; hypodermis; and mechanosensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-seven chemicals including methylmercury hydroxide; 1-methylnicotinamide; and manganese chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Phosphorylation site; PAN domain; and PAN/Apple domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H03E18.1
    Corresponding_CDS_history: H03E18.1:wp133
    Corresponding_transcript: H03E18.1.1
    Other_sequence: Dviv_isotig23088
      CJC02753_1
      Name_isotig04602
      JI220335.1
    Associated_feature (11)
  Experimental_info: RNAi_result: WBRNAi00049272 Inferred_automatically: RNAi_primary
      WBRNAi00016171 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021230
      Expr1038267
      Expr1153016
      Expr2004508
      Expr2022733
    Drives_construct: WBCnstr00026027
    Construct_product: WBCnstr00026027
    Microarray_results (20)
    Expression_cluster (258)
    Interaction (140)
  Map_info: Positive: Positive_clone: H03E18 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 0.0949242
  Method: Gene