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WormBase Tree Display for Gene: WBGene00019143

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Name Class

WBGene00019143SMapS_parentSequenceH01M10
IdentityVersion1
NameSequence_nameH01M10.1
Molecular_nameH01M10.1
H01M10.1.1
CE40080
Other_nameCELE_H01M10.1Accession_evidenceNDBBX284606
Public_nameH01M10.1
DB_infoDatabaseAceViewgeneXD194
WormQTLgeneWBGene00019143
WormFluxgeneWBGene00019143
NDBlocus_tagCELE_H01M10.1
PanthergeneCAEEL|WormBase=WBGene00019143|UniProtKB=Q9N5P5
familyPTHR35373
NCBIgene186663
RefSeqproteinNM_076065.7
TrEMBLUniProtAccQ9N5P5
UniProt_GCRPUniProtAccQ9N5P5
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (40)
RNASeq_FPKM (74)
OrthologWBGene00025209Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00154089Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00058179Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00208947Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00228142Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3420Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8848Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g12640Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18871Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15723Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21887Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16625Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13066Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1294Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12527Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00033.g1910Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-H01M10.1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold582.g4639Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00066.g3160Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01015Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023882Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00681Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_X0098920Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g18641Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240726Onchocerca volvulusFrom_analysisWormBase-Compara
ParalogWBGene00011137Caenorhabditis elegansFrom_analysisPanther
WBGene00015947Caenorhabditis elegansFrom_analysisPanther
WBGene00020759Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABplpppaaa; ABplpppapa; coelomocyte; excretory gland cell; and rectal epithelial cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and sir-2.1 based on microarray and RNA-seq studies. Is affected by six chemicals including Tunicamycin; Doxycycline; and paraquat based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSH01M10.1
Corresponding_CDS_historyH01M10.1:wp156
Corresponding_transcriptH01M10.1.1
Other_sequenceJI173241.1
Associated_featureWBsf1004373
WBsf1004374
WBsf1004375
WBsf1022484
WBsf237099
Experimental_infoRNAi_resultWBRNAi00062526Inferred_automaticallyRNAi_primary
WBRNAi00049255Inferred_automaticallyRNAi_primary
WBRNAi00033640Inferred_automaticallyRNAi_primary
Expr_patternExpr1014143
Expr1038265
Expr1152999
Expr2004502
Expr2022728
Drives_constructWBCnstr00026031
Construct_productWBCnstr00026031
Microarray_results (19)
Expression_cluster (128)
Map_infoPositivePositive_cloneH01M10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-14.3367
MethodGene