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WormBase Tree Display for Gene: WBGene00019143

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Name Class

WBGene00019143SMapS_parentSequenceH01M10
IdentityVersion1
NameSequence_nameH01M10.1
Molecular_nameH01M10.1
H01M10.1.1
CE40080
Other_nameCELE_H01M10.1Accession_evidenceNDBBX284606
Public_nameH01M10.1
DB_infoDatabaseAceViewgeneXD194
WormQTLgeneWBGene00019143
WormFluxgeneWBGene00019143
NDBlocus_tagCELE_H01M10.1
PanthergeneCAEEL|WormBase=WBGene00019143|UniProtKB=Q9N5P5
familyPTHR35373
NCBIgene186663
RefSeqproteinNM_076065.7
TrEMBLUniProtAccQ9N5P5
UniProt_GCRPUniProtAccQ9N5P5
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (40)
RNASeq_FPKM (74)
Ortholog (25)
ParalogWBGene00011137Caenorhabditis elegansFrom_analysisPanther
WBGene00015947Caenorhabditis elegansFrom_analysisPanther
WBGene00020759Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABplpppaaa; ABplpppapa; coelomocyte; excretory gland cell; and rectal epithelial cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and sir-2.1 based on microarray and RNA-seq studies. Is affected by six chemicals including Tunicamycin; Doxycycline; and paraquat based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSH01M10.1
Corresponding_CDS_historyH01M10.1:wp156
Corresponding_transcriptH01M10.1.1
Other_sequenceJI173241.1
Associated_featureWBsf1004373
WBsf1004374
WBsf1004375
WBsf1022484
WBsf237099
Experimental_infoRNAi_resultWBRNAi00062526Inferred_automaticallyRNAi_primary
WBRNAi00049255Inferred_automaticallyRNAi_primary
WBRNAi00033640Inferred_automaticallyRNAi_primary
Expr_patternExpr1014143
Expr1038265
Expr1152999
Expr2004502
Expr2022728
Drives_constructWBCnstr00026031
Construct_productWBCnstr00026031
Microarray_results (19)
Expression_clusterWBPaper00037682:sma-2_sma-4_upregulated
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00042561:smg-2(RNAi)_downregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Oogenic
WBPaper00048988:neuron_expressed
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00055013:hmg-4(RNAi)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055482:Tunicamycin_upregulated
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056293:rpl-5(0)-rpl-33(0)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00057288:Cold_downregulated_transcript
WBPaper00059471:EGL-43_interacting
WBPaper00060661:sensory-neuron_enriched
WBPaper00060764:swsn-1(os22ts)_downregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061007:HB101_downregulated
WBPaper00061203:let-418(n3536)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061340:B
WBPaper00061340:Coelomocyte
WBPaper00061340:Excretory_gland
WBPaper00061340:K_Kprime
WBPaper00061340:Parents_of_PHsh_hyp8_hyp9
WBPaper00061340:Parents_of_Y_DA6_DA7_DA9
WBPaper00061340:Parent_of_K_Kprime
WBPaper00061340:Y
WBPaper00061527:cfz-2_18944-cfz-2_2268
WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
WBPaper00061651:Coelomocyte_enriched
WBPaper00062146:MOG-7-degron_2h_regulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062456:doxycycline_downregulated_CB4856_transcript
WBPaper00062456:doxycycline_downregulated_N2_transcript
WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064716:paraquat_upregulated
WBPaper00064769:him-17(me24)_downregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065288:mdt-15(tm2182)_downregulated
WBPaper00065841:69_0
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_14
WBPaper00024671:AFD_vs_AWB_upregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00029437:dcr-1_downregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00032948:StarveUp1
WBPaper00034739:N2moreDR1350
WBPaper00035227:heat_shock_regulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00036286:Pattern_F
WBPaper00036383:ash-2_Day8_regulated
WBPaper00038172:aak-2overexpression_down_regulated
WBPaper00038172:crh-1null_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041960:daf-16_fasting_upregulated
WBPaper00041960:kgb-1_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042258:DA1877_downregulated_GravidAdult
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00047070:DAF-16-dependent_UV_response
WBPaper00047070:N2_starvation_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00050538:Fasting_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(122_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MDE
[cgc5767]:expression_class_MD_pd(23_min)
[cgc5767]:expression_class_ME
Map_infoPositivePositive_cloneH01M10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-14.3367
MethodGene