WormBase Tree Display for Gene: WBGene00019141
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WBGene00019141 | SMap | S_parent | Sequence | F59H6 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | bath | ||||||
Allele (79) | |||||||
Strain | WBStrain00037609 | ||||||
RNASeq_FPKM (74) | |||||||
Contained_in_operon | CEOP2060 | ||||||
Ortholog (86) | |||||||
Paralog (82) | |||||||
Structured_description | Automated_description | Enriched in ABalaaaala; ABalaapaaa; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F59H6.11 | |||||
Corresponding_transcript | F59H6.11.1 | ||||||
Other_sequence | CR00540 | ||||||
CRC02056_1 | |||||||
CR09964 | |||||||
Associated_feature | WBsf1011665 | ||||||
WBsf222734 | |||||||
Experimental_info | RNAi_result | WBRNAi00082625 | Inferred_automatically | RNAi_primary | |||
WBRNAi00061840 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033232 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049243 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082528 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016150 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1025161 | ||||||
Expr1038264 | |||||||
Expr1152983 | |||||||
Expr2009566 | |||||||
Expr2027803 | |||||||
Drives_construct | WBCnstr00026033 | ||||||
Construct_product | WBCnstr00026033 | ||||||
Microarray_results (14) | |||||||
Expression_cluster (110) | |||||||
Interaction (78) | |||||||
Map_info | Map | II | Position | -13.9776 | Error | 0.002972 | |
Positive | Positive_clone | F59H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00041771 | ||||||
WBPaper00060694 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |