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WormBase Tree Display for Gene: WBGene00019141

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Name Class

WBGene00019141SMapS_parentSequenceF59H6
IdentityVersion2
NameCGC_namebath-5Person_evidenceWBPerson655
Sequence_nameF59H6.11
Molecular_nameF59H6.11
F59H6.11.1
CE20917
Other_nameCELE_F59H6.11Accession_evidenceNDBBX284602
Public_namebath-5
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
222 Aug 2005 16:08:42WBPerson2970Name_changeCGC_namebath-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbath
Allele (79)
StrainWBStrain00037609
RNASeq_FPKM (74)
Contained_in_operonCEOP2060
Ortholog (86)
Paralog (82)
Structured_descriptionAutomated_descriptionEnriched in ABalaaaala; ABalaapaaa; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF59H6.11
Corresponding_transcriptF59H6.11.1
Other_sequenceCR00540
CRC02056_1
CR09964
Associated_featureWBsf1011665
WBsf222734
Experimental_infoRNAi_resultWBRNAi00082625Inferred_automaticallyRNAi_primary
WBRNAi00061840Inferred_automaticallyRNAi_primary
WBRNAi00033232Inferred_automaticallyRNAi_primary
WBRNAi00049243Inferred_automaticallyRNAi_primary
WBRNAi00082528Inferred_automaticallyRNAi_primary
WBRNAi00016150Inferred_automaticallyRNAi_primary
Expr_patternExpr1025161
Expr1038264
Expr1152983
Expr2009566
Expr2027803
Drives_constructWBCnstr00026033
Construct_productWBCnstr00026033
Microarray_results (14)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032425:up_in_lin-35
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:germline-precursors_embryo_enriched
WBPaper00037950:germline-precursors_embryo_SelectivelyEnriched
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038168:lin-35_upregulated
WBPaper00042194:nhr-114(RNAi)_upregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00045050:drh-3 (ne4253)_downregulated
WBPaper00045521:Gender_Neutral
WBPaper00045861:wdr-5(ok1417)_downregulated
WBPaper00048988:neuron_expressed
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050743:elli-1(sam-3)_downregulated
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00051039:germline_enriched
WBPaper00053289:DREAM-target
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055648:germline_expressed
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056826:hmc_biased
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057083:daf-2(e1370)rsks-1(ok1255)_post-transcriptional_upregulated
WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_upregulated
WBPaper00057162:meg-3_meg-4_upregulated_sRNA
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058958:100mGy-irradiation-72h_downregulated
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060661:sensory-neuron_depleted
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:HB101_downregulated
WBPaper00061203:let-418(n3536)_downregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061340:AIN_parent
WBPaper00061340:Germline
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061527:T22D1.5-inx-14
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064315:mes-4(bn73)_downregulated_EGCs
WBPaper00064716:paraquat_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066038:mip-1(how5)_downregulated
cgc4489_group_2
WBPaper00025032:cluster_4
WBPaper00025099:NI_specific
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00034739:N2moreDR1350
WBPaper00035227:heat_shock_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036130:mir-243_down_regulated
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00036429:glp-1(oz112)_upregulated
WBPaper00038172:aak-2overexpression_down_regulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041906:I-4317_vs_OP50_10d
WBPaper00041939:control_vs_EtBr-exposed_3h
WBPaper00045263:nuo-6(qm200)_downregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_E
[cgc6390]:oogenesis-enriched
Interaction (78)
Map_infoMapIIPosition-13.9776Error0.002972
PositivePositive_cloneF59H6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00041771
WBPaper00060694
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene