WormBase Tree Display for Gene: WBGene00019105
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WBGene00019105 | SMap | S_parent | Sequence | F59D6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | asp-8 | Person_evidence | WBPerson261 | |||
Sequence_name | F59D6.3 | ||||||
Molecular_name | F59D6.3 | ||||||
F59D6.3.1 | |||||||
CE51092 | |||||||
Other_name | CELE_F59D6.3 | Accession_evidence | NDB | BX284605 | |||
Public_name | asp-8 | ||||||
DB_info | Database | AceView | gene | 5D505 | |||
WormQTL | gene | WBGene00019105 | |||||
WormFlux | gene | WBGene00019105 | |||||
NDB | locus_tag | CELE_F59D6.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00019105|UniProtKB=O16338 | |||||
family | PTHR13683 | ||||||
NCBI | gene | 178750 | |||||
RefSeq | protein | NM_071424.7 | |||||
TREEFAM | TREEFAM_ID | TF315800 | |||||
TrEMBL | UniProtAcc | O16338 | |||||
UniProt_GCRP | UniProtAcc | O16338 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | asp | ||||||
Allele (131) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00027884 | ||||||
00027885 | |||||||
00027886 | |||||||
00124038 | |||||||
00124039 | |||||||
Ortholog (58) | |||||||
Paralog (17) | |||||||
Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. Is an ortholog of human PGC (progastricsin). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F59D6.3 | |||||
Corresponding_CDS_history | F59D6.3:wp250 | ||||||
Corresponding_transcript | F59D6.3.1 | ||||||
Other_sequence | CBC01221_1 | ||||||
Associated_feature | WBsf231543 | ||||||
Experimental_info | RNAi_result | WBRNAi00049176 | Inferred_automatically | RNAi_primary | |||
WBRNAi00002198 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076507 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089097 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016096 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1152922 | ||||||
Expr2009472 | |||||||
Drives_construct | WBCnstr00026061 | ||||||
Construct_product | WBCnstr00026061 | ||||||
Microarray_results (15) | |||||||
Expression_cluster (298) | |||||||
Interaction (75) | |||||||
Map_info | Map | V | Position | -12.796 | |||
Positive | Positive_clone | F59D6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00059755 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |