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WormBase Tree Display for Gene: WBGene00019021

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Name Class

WBGene00019021SMapS_parentSequenceF57H12
IdentityVersion1
NameSequence_nameF57H12.6
Molecular_nameF57H12.6
F57H12.6.1
CE32447
Other_nameCELE_F57H12.6Accession_evidenceNDBBX284604
Public_nameF57H12.6
DB_infoDatabaseAceViewgene4I740
WormQTLgeneWBGene00019021
WormFluxgeneWBGene00019021
NDBlocus_tagCELE_F57H12.6
PanthergeneCAEEL|WormBase=WBGene00019021|UniProtKB=O45097
familyPTHR21593
NCBIgene177593
RefSeqproteinNM_068932.8
TREEFAMTREEFAM_IDTF316270
TrEMBLUniProtAccO45097
UniProt_GCRPUniProtAccO45097
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (19)
RNASeq_FPKM (74)
OrthologWBGene00113499Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00107423Pristionchus pacificusFrom_analysisOMA
WBGene00037285Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00059386Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00138545Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00143979Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00155466Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00224794Brugia malayiFrom_analysisWormBase-Compara
CSP26.g18005Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP29.g7232Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP40.g6554Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-F57H12.6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12786Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00364.g10187Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_15991Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014796Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11177Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_40104900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g10967Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (38)
Structured_descriptionAutomated_descriptionEnriched in hypodermis; intestine; male-specific anatomical entity; and sensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on proteomic; microarray; and RNA-seq studies. Is affected by thirty-two chemicals including Nitric Oxide; methylmercury hydroxide; and 1-methylnicotinamide based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_info (5)
Experimental_infoRNAi_resultWBRNAi00048917Inferred_automaticallyRNAi_primary
Expr_patternExpr1027076
Expr1152656
Expr2004363
Expr2022587
Drives_constructWBCnstr00026119
Construct_productWBCnstr00026119
Microarray_results (18)
Expression_cluster (358)
InteractionWBInteraction000291069
WBInteraction000366667
WBInteraction000403838
WBInteraction000407833
WBInteraction000431756
WBInteraction000447398
WBInteraction000568468
WBInteraction000571026
Map_infoPositivePositive_cloneF57H12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV3.51162
ReferenceWBPaper00061421
MethodGene