WormBase Tree Display for Gene: WBGene00019006
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WBGene00019006 | SMap | S_parent | Sequence | F57B10 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | spg | |||||
Allele (22) | ||||||
Strain | WBStrain00003325 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00033229 | |||||
00033230 | ||||||
00033231 | ||||||
00033232 | ||||||
00033233 | ||||||
00123967 | ||||||
00123968 | ||||||
Contained_in_operon | CEOP1952 | |||||
CEOP1954 | ||||||
CEOP1332 | ||||||
Ortholog (37) | ||||||
Structured_description | Automated_description | Predicted to be involved in cell division and negative regulation of BMP signaling pathway. Predicted to be located in plasma membrane. Expressed in IL2DL; IL2DR; IL2VL; IL2VR; and body wall musculature. Human ortholog(s) of this gene implicated in Troyer syndrome. Is an ortholog of human SPART (spartin). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:0050886 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18514) | |
Molecular_info | Corresponding_CDS | F57B10.9 | ||||
Corresponding_transcript | F57B10.9.1 | |||||
Other_sequence (24) | ||||||
Associated_feature | WBsf649245 | |||||
WBsf664345 | ||||||
WBsf219605 | ||||||
Experimental_info | RNAi_result | WBRNAi00048826 | Inferred_automatically | RNAi_primary | ||
WBRNAi00003844 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00033013 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00116493 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00062280 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern (8) | ||||||
Drives_construct | WBCnstr00003796 | |||||
WBCnstr00026130 | ||||||
Construct_product | WBCnstr00026130 | |||||
Microarray_results (18) | ||||||
Expression_cluster (156) | ||||||
Interaction | WBInteraction000151957 | |||||
WBInteraction000179899 | ||||||
WBInteraction000350496 | ||||||
WBInteraction000355127 | ||||||
WBInteraction000388703 | ||||||
WBInteraction000443460 | ||||||
WBInteraction000565545 | ||||||
WBInteraction000581082 | ||||||
WBInteraction000584365 | ||||||
Map_info | Map | I | Position | 1.21107 | ||
Positive | Positive_clone | F57B10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00047000 | ||||||
WBPaper00053550 | ||||||
WBPaper00055090 | ||||||
WBPaper00063946 | ||||||
WBPaper00064339 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |