WormBase Tree Display for Gene: WBGene00019006
expand all nodes | collapse all nodes | view schema
WBGene00019006 | SMap | S_parent | Sequence | F57B10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | spg-20 | Paper_evidence | WBPaper00047000 | |||||
Person_evidence | WBPerson2876 | ||||||||
Sequence_name | F57B10.9 | ||||||||
Molecular_name | F57B10.9 | ||||||||
F57B10.9.1 | |||||||||
CE30546 | |||||||||
Other_name | CELE_F57B10.9 | Accession_evidence | NDB | BX284601 | |||||
Public_name | spg-20 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 26 Apr 2016 12:10:59 | WBPerson2970 | Name_change | CGC_name | spg-20 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | spg | ||||||||
Allele (22) | |||||||||
Strain | WBStrain00003325 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00033229 | ||||||||
00033230 | |||||||||
00033231 | |||||||||
00033232 | |||||||||
00033233 | |||||||||
00123967 | |||||||||
00123968 | |||||||||
Contained_in_operon (3) | |||||||||
Ortholog (37) | |||||||||
Structured_description | Automated_description | Predicted to be involved in cell division and negative regulation of BMP signaling pathway. Predicted to be located in plasma membrane. Expressed in IL2DL; IL2DR; IL2VL; IL2VR; and body wall musculature. Human ortholog(s) of this gene implicated in Troyer syndrome. Is an ortholog of human SPART (spartin). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0050886 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18514) | ||||
Molecular_info | Corresponding_CDS | F57B10.9 | |||||||
Corresponding_transcript | F57B10.9.1 | ||||||||
Other_sequence (24) | |||||||||
Associated_feature | WBsf649245 | ||||||||
WBsf664345 | |||||||||
WBsf219605 | |||||||||
Experimental_info | RNAi_result | WBRNAi00048826 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003844 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033013 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00116493 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062280 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1145 | ||||||||
Expr6238 | |||||||||
Expr14456 | |||||||||
Expr1026640 | |||||||||
Expr1038207 | |||||||||
Expr1152581 | |||||||||
Expr2016052 | |||||||||
Expr2034287 | |||||||||
Drives_construct | WBCnstr00003796 | ||||||||
WBCnstr00026130 | |||||||||
Construct_product | WBCnstr00026130 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (156) | |||||||||
Interaction | WBInteraction000151957 | ||||||||
WBInteraction000179899 | |||||||||
WBInteraction000350496 | |||||||||
WBInteraction000355127 | |||||||||
WBInteraction000388703 | |||||||||
WBInteraction000443460 | |||||||||
WBInteraction000565545 | |||||||||
WBInteraction000581082 | |||||||||
WBInteraction000584365 | |||||||||
Map_info | Map | I | Position | 1.21107 | |||||
Positive | Positive_clone | F57B10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00047000 | |||||||||
WBPaper00053550 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00063946 | |||||||||
WBPaper00064339 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |