WormBase Tree Display for Gene: WBGene00018996

WBGene00018996 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 1
    Name: Sequence_name: F57B9.1
      Molecular_name: F57B9.1
        F57B9.1.1
        CE44186
        F57B9.1.2
      Other_name: CELE_F57B9.1 Accession_evidence: NDB BX284603
      Public_name: F57B9.1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (25)
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog: WBGene00036408 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00061630 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00164825 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00104641 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00224772 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5672 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7274 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21922 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20609 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12949 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g310 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g5581 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5942 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16806 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5075 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2998 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00921.g14942 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_X.g23942 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14426 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00301.g8998 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18892 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009946 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08470 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10638 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15076 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30250600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_30251000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_30251300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_30251800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8040 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00218106 Caenorhabditis japonica From_analysis: WormBase-Compara
      nigoni.pc_2016.07.11_023.g28424 Caenorhabditis nigoni From_analysis: WormBase-Compara
      WBGene00246387 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00261084 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286283 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000000239 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0051472 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-060602-2 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:30260 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2144151 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:621456 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable pyridoxamine phosphate oxidase activity. Predicted to be involved in pyridoxal phosphate biosynthetic process. Human ortholog(s) of this gene implicated in pyridoxamine 5'-phosphate oxidase deficiency. Is an ortholog of human PNPO (pyridoxamine 5'-phosphate oxidase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0111329 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:30260)
  Molecular_info: Corresponding_CDS: F57B9.1
    Corresponding_CDS_history: F57B9.1:wp208
    Corresponding_transcript: F57B9.1.1
      F57B9.1.2
    Other_sequence (43)
    Associated_feature: WBsf645306
      WBsf654971
      WBsf225182
      WBsf225183
  Experimental_info: RNAi_result: WBRNAi00098202 Inferred_automatically: RNAi_primary
      WBRNAi00033540 Inferred_automatically: RNAi_primary
      WBRNAi00005184 Inferred_automatically: RNAi_primary
      WBRNAi00015877 Inferred_automatically: RNAi_primary
      WBRNAi00048831 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021976
      Expr1038199
      Expr1152586
      Expr2004341
      Expr2022566
    Drives_construct: WBCnstr00026139
    Construct_product: WBCnstr00026139
    Microarray_results (20)
    Expression_cluster (105)
    Interaction (57)
  Map_info: Positive: Positive_clone: F57B9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -0.873222
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene