WormBase Tree Display for Gene: WBGene00018961

WBGene00018961 SMap: S_parent: Sequence: F56D1
  Identity: Version: 2
    Name: CGC_name: mrps-16 Person_evidence: WBPerson261
            WBPerson555
      Sequence_name: F56D1.3
      Molecular_name: F56D1.3
        F56D1.3.1
        CE29407
      Other_name: CELE_F56D1.3 Accession_evidence: NDB BX284602
      Public_name: mrps-16
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Jun 2011 16:50:10 WBPerson2970 Name_change: CGC_name: mrps-16
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mrps
    Allele (15)
    Strain: WBStrain00002418
    RNASeq_FPKM (74)
    GO_annotation (15)
    Contained_in_operon: CEOP2184
    Ortholog (29)
    Structured_description: Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 2. Is an ortholog of human MRPS16 (mitochondrial ribosomal protein S16). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0111483 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14048)
  Molecular_info: Corresponding_CDS: F56D1.3
    Corresponding_transcript: F56D1.3.1
    Other_sequence (28)
    Associated_feature: WBsf657597
      WBsf221286
  Experimental_info: RNAi_result: WBRNAi00071138 Inferred_automatically: RNAi_primary
      WBRNAi00048682 Inferred_automatically: RNAi_primary
      WBRNAi00025704 Inferred_automatically: RNAi_primary
      WBRNAi00008876 Inferred_automatically: RNAi_primary
      WBRNAi00000302 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr6218
      Expr1017432
      Expr1038182
      Expr1152441
      Expr2013738
      Expr2031973
    Drives_construct: WBCnstr00003033
      WBCnstr00026162
    Construct_product: WBCnstr00026162
    Microarray_results (20)
    Expression_cluster (98)
    Interaction: WBInteraction000045960
      WBInteraction000046150
      WBInteraction000046171
      WBInteraction000119489
      WBInteraction000120012
      WBInteraction000161121
      WBInteraction000192080
      WBInteraction000194102
      WBInteraction000196825
      WBInteraction000205853
      WBInteraction000211559
      WBInteraction000218337
      WBInteraction000229284
      WBInteraction000234848
      WBInteraction000245224
      WBInteraction000262858
      WBInteraction000268820
      WBInteraction000270402
      WBInteraction000271460
      WBInteraction000272605
      WBInteraction000274017
      WBInteraction000274197
      WBInteraction000279139
      WBInteraction000279466
      WBInteraction000281088
      WBInteraction000287634
      WBInteraction000289025
      WBInteraction000296897
      WBInteraction000301072
      WBInteraction000302102
      WBInteraction000306924
      WBInteraction000306981
      WBInteraction000309114
      WBInteraction000309297
      WBInteraction000312462
      WBInteraction000321051
      WBInteraction000321646
      WBInteraction000322866
      WBInteraction000327842
      WBInteraction000330547
      WBInteraction000336012
      WBInteraction000336867
      WBInteraction000338451
      WBInteraction000348939
      WBInteraction000349883
      WBInteraction000352739
      WBInteraction000355246
      WBInteraction000358702
      WBInteraction000360042
      WBInteraction000366106
      WBInteraction000370190
      WBInteraction000382724
      WBInteraction000386074
      WBInteraction000389963
      WBInteraction000391326
      WBInteraction000394568
      WBInteraction000401122
      WBInteraction000403526
      WBInteraction000408530
      WBInteraction000411498
      WBInteraction000413440
      WBInteraction000413486
      WBInteraction000414506
      WBInteraction000417725
      WBInteraction000419882
      WBInteraction000420007
      WBInteraction000420442
      WBInteraction000421212
      WBInteraction000427282
      WBInteraction000430600
      WBInteraction000438141
      WBInteraction000443620
      WBInteraction000445508
      WBInteraction000451746
      WBInteraction000457568
      WBInteraction000462417
      WBInteraction000561157
      WBInteraction000570302
      WBInteraction000575428
  Map_info: Map: II Position: -1.28817 Error: 0.007457
    Positive: Positive_clone: F56D1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00047123
    WBPaper00049828
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene