WormBase Tree Display for Gene: WBGene00018932

WBGene00018932 SMap: S_parent: Sequence: F56B3
  Identity: Version: 2
    Name: CGC_name: mrpl-2 Person_evidence: WBPerson261
      Sequence_name: F56B3.8
      Molecular_name: F56B3.8a
        F56B3.8a.1
        CE34320
        F56B3.8b
        CE48558
        F56B3.8b.1
      Other_name: CELE_F56B3.8 Accession_evidence: NDB BX284604
      Public_name: mrpl-2
    DB_info: Database: AceView gene 4B529
        WormQTL gene WBGene00018932
        WormFlux gene WBGene00018932
        NDB locus_tag CELE_F56B3.8
        Panther gene CAEEL|WormBase=WBGene00018932|UniProtKB=O45110
          family PTHR13691
        NCBI gene 176903
        RefSeq protein NM_001380018.1
            NM_067586.6
        TrEMBL UniProtAcc U4PFC3
            O45110
        UniProt_GCRP UniProtAcc O45110
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Jun 2011 16:50:10 WBPerson2970 Name_change: CGC_name: mrpl-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mrpl
    Allele (66)
    RNASeq_FPKM (74)
    GO_annotation: 00033898
      00033899
      00033900
      00033901
      00033902
      00033903
      00123904
      00123905
      00123906
    Ortholog (34)
    Paralog: WBGene00004413 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Is an ortholog of human MRPL2 (mitochondrial ribosomal protein L2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F56B3.8a
      F56B3.8b
    Corresponding_CDS_history: F56B3.8:wp102
    Corresponding_transcript: F56B3.8a.1
      F56B3.8b.1
    Other_sequence (67)
    Associated_feature: WBsf645770
      WBsf659895
  Experimental_info: RNAi_result: WBRNAi00071396 Inferred_automatically: RNAi_primary
      WBRNAi00109877 Inferred_automatically: RNAi_primary
      WBRNAi00071395 Inferred_automatically: RNAi_primary
      WBRNAi00106864 Inferred_automatically: RNAi_primary
      WBRNAi00065731 Inferred_automatically: RNAi_primary
      WBRNAi00048641 Inferred_automatically: RNAi_primary
      WBRNAi00032930 Inferred_automatically: RNAi_primary
      WBRNAi00107025 Inferred_automatically: RNAi_primary
      WBRNAi00025699 Inferred_automatically: RNAi_primary
      WBRNAi00008875 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010526
      Expr1038169
      Expr1152405
      Expr2013711
      Expr2031946
    Drives_construct: WBCnstr00026186
    Construct_product: WBCnstr00026186
    Regulate_expr_cluster: WBPaper00060951:mrpl-2(osa3)_downregulated
      WBPaper00060951:mrpl-2(osa3)_upregulated
    Microarray_results (22)
    Expression_cluster (105)
    SAGE_tag: SAGE:caaaggttcataatttg Strand: Sense
        Unambiguously_mapped
      SAGE:tttatgtgggagcttaa Strand: Antisense
      SAGE:caaaggttca Strand: Sense
        Unambiguously_mapped
      SAGE:aaagccggtg Strand: Sense
        Unambiguously_mapped
      SAGE:aaataatcaa Strand: Antisense
      SAGE:taatcctgatagatcct Strand: Antisense
    Interaction (73)
  Map_info: Map: IV Position: -23.5092 Error: 0.005638
    Positive: Positive_clone: F56B3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00060951
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene