WormBase Tree Display for Gene: WBGene00018866
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| WBGene00018866 | SMap | S_parent | Sequence | F55A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | nath-10 | Person_evidence | WBPerson6405 | |||||
| WBPerson172 | |||||||||
| Sequence_name | F55A12.8 | ||||||||
| Molecular_name | F55A12.8 | ||||||||
| F55A12.8.1 | |||||||||
| CE11131 | |||||||||
| Other_name | let-599 | Person_evidence | WBPerson533 | ||||||
| CELE_F55A12.8 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | nath-10 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 15 Feb 2011 15:52:17 | WBPerson2970 | Name_change | CGC_name | nath-10 | ||||
| 3 | 05 Mar 2015 09:44:45 | WBPerson2970 | Event | Acquires_merge | WBGene00002777 | ||||
| Name_change | Other_name | let-599 | |||||||
| Acquires_merge | WBGene00002777 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nath | ||||||||
| Allele (32) | |||||||||
| Legacy_information | [McDowall JS] lethal | ||||||||
| [McDowall JS] Sterile adult | |||||||||
| [C.elegansII] h290 : sterile adult. NA1. [KR] | |||||||||
| Strain | WBStrain00001467 | ||||||||
| WBStrain00001159 | |||||||||
| WBStrain00001466 | |||||||||
| WBStrain00023753 | |||||||||
| WBStrain00032814 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Ortholog (40) | |||||||||
| Structured_description | Automated_description | Predicted to enable rRNA cytidine N-acetyltransferase activity and tRNA binding activity. Predicted to be involved in rRNA acetylation involved in maturation of SSU-rRNA. Predicted to be located in nucleolus. Predicted to be part of small-subunit processome. Expressed in head; seam cell; and tail. Is an ortholog of human NAT10 (N-acetyltransferase 10). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F55A12.8 | |||||||
| Corresponding_transcript | F55A12.8.1 | ||||||||
| Other_sequence (40) | |||||||||
| Associated_feature | WBsf219413 | ||||||||
| Experimental_info | RNAi_result (23) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00002051 | ||||||||
| WBCnstr00004201 | |||||||||
| WBCnstr00026231 | |||||||||
| Construct_product | WBCnstr00026231 | ||||||||
| Regulate_expr_cluster | WBPaper00061466:nath-10(icb99)_downregulated | ||||||||
| WBPaper00061466:nath-10(icb99)_upregulated | |||||||||
| WBPaper00061466:nath-10(icb102)_downregulated | |||||||||
| WBPaper00061466:nath-10(icb102)_upregulated | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction (376) | |||||||||
| Map_info | Map | I | Position | -0.07701 | Error | 0.008125 | |||
| Positive | Positive_clone | F55A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Negative | Negative_clone | C12H4 | |||||||
| C24H1 | |||||||||
| C28A7 | |||||||||
| C30A6 | |||||||||
| F40D12 | |||||||||
| M01A10 | |||||||||
| M01E11 | |||||||||
| Mapping_data | 2_point | 6034 | |||||||
| 6033 | |||||||||
| Pos_neg_data | 6035 | ||||||||
| 6036 | |||||||||
| 6037 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (17) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [McDowall JS] Extrachromosomal arrays containing three cosmids generated, then manipulated genetically. | |||||||||
| Method | Gene |
