WormBase Tree Display for Gene: WBGene00018847
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| WBGene00018847 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | marc-6 | Person_evidence | WBPerson2838 | |||||
| Sequence_name | F55A3.1 | ||||||||
| Molecular_name | F55A3.1 | ||||||||
| F55A3.1.1 | |||||||||
| CE37022 | |||||||||
| Other_name | CELE_F55A3.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | marc-6 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 Aug 2006 10:32:03 | WBPerson2970 | Name_change | CGC_name | marc-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | marc | ||||||||
| Allele (74) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00080746 | ||||||||
| 00080747 | |||||||||
| 00080748 | |||||||||
| 00080749 | |||||||||
| 00080750 | |||||||||
| 00080751 | |||||||||
| 00123848 | |||||||||
| Contained_in_operon | CEOP1648 | ||||||||
| CEOP1900 | |||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in protein polyubiquitination and ubiquitin-dependent ERAD pathway. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in familial adult myoclonic epilepsy 3. Is an ortholog of human MARCHF6 (membrane associated ring-CH-type finger 6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111695 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30550) | ||||
| Molecular_info | Corresponding_CDS | F55A3.1 | |||||||
| Corresponding_CDS_history | F55A3.1:wp127 | ||||||||
| Corresponding_transcript | F55A3.1.1 | ||||||||
| Other_sequence (98) | |||||||||
| Associated_feature | WBsf656913 | ||||||||
| WBsf985099 | |||||||||
| WBsf985100 | |||||||||
| WBsf985101 | |||||||||
| WBsf985102 | |||||||||
| WBsf1010595 | |||||||||
| WBsf218489 | |||||||||
| WBsf218490 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00093150 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00093148 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00093147 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022375 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048426 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00093400 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094674 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00093146 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011582 | ||||||||
| Expr1038131 | |||||||||
| Expr1152214 | |||||||||
| Expr2013387 | |||||||||
| Expr2031619 | |||||||||
| Drives_construct | WBCnstr00026244 | ||||||||
| Construct_product | WBCnstr00026244 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction | WBInteraction000217739 | ||||||||
| WBInteraction000271911 | |||||||||
| WBInteraction000336792 | |||||||||
| WBInteraction000346057 | |||||||||
| WBInteraction000358961 | |||||||||
| WBInteraction000422036 | |||||||||
| WBInteraction000520511 | |||||||||
| WBInteraction000520512 | |||||||||
| WBProcess | WBbiopr:00000076 | ||||||||
| Map_info | Map | I | Position | 5.19175 | Error | 0.049121 | |||
| Positive | Positive_clone | F55A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00030999 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059773 | |||||||||
| WBPaper00060631 | |||||||||
| WBPaper00065116 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
