WormBase Tree Display for Gene: WBGene00018839
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| WBGene00018839 | SMap | S_parent | Sequence | F54H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54H5.2 | |||||||
| Molecular_name | F54H5.2a | ||||||||
| F54H5.2a.1 | |||||||||
| CE01965 | |||||||||
| F54H5.2b | |||||||||
| CE50342 | |||||||||
| F54H5.2c | |||||||||
| CE50484 | |||||||||
| F54H5.2b.1 | |||||||||
| F54H5.2c.1 | |||||||||
| Other_name | F54H5.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F54H5.2 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | F54H5.2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001291 | ||||||||
| 00001292 | |||||||||
| 00050613 | |||||||||
| 00050614 | |||||||||
| 00050615 | |||||||||
| 00123840 | |||||||||
| 00123841 | |||||||||
| 00123842 | |||||||||
| Ortholog (90) | |||||||||
| Paralog (93) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in signal transduction. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 11. Is an ortholog of human TTBK1 (tau tubulin kinase 1) and TTBK2 (tau tubulin kinase 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050961 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:19141) | ||||
| Molecular_info | Corresponding_CDS | F54H5.2a | |||||||
| F54H5.2b | |||||||||
| F54H5.2c | |||||||||
| Corresponding_transcript | F54H5.2a.1 | ||||||||
| F54H5.2b.1 | |||||||||
| F54H5.2c.1 | |||||||||
| Other_sequence (18) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043267 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012459 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015673 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032827 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043268 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1152191 | ||||||||
| Expr2004188 | |||||||||
| Expr2022408 | |||||||||
| Drives_construct | WBCnstr00026251 | ||||||||
| Construct_product | WBCnstr00026251 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (142) | |||||||||
| Interaction | WBInteraction000325067 | ||||||||
| WBInteraction000337935 | |||||||||
| WBInteraction000395069 | |||||||||
| WBInteraction000457859 | |||||||||
| Map_info | Positive | Positive_clone | F54H5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -0.0552751 | |||||||
| Reference | WBPaper00027258 | ||||||||
| Method | Gene |
