WormBase Tree Display for Gene: WBGene00018820

WBGene00018820 SMap: S_parent: Sequence: F54D12
  Identity: Version: 1
    Name: Sequence_name: F54D12.7
      Molecular_name: F54D12.7
        F54D12.7.1
        CE54031
      Other_name: CELE_F54D12.7 Accession_evidence: NDB BX284602
      Public_name: F54D12.7
    DB_info: Database: AceView gene 2B672
        WormQTL gene WBGene00018820
        WormFlux gene WBGene00018820
        NDB locus_tag CELE_F54D12.7
        Panther gene CAEEL|WormBase=WBGene00018820|UniProtKB=O44831
          family PTHR47629
        NCBI gene 173516
        RefSeq protein NM_001377695.1
        TREEFAM TREEFAM_ID TF343421
        TrEMBL UniProtAcc O44831
        UniProt_GCRP UniProtAcc O44831
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (57)
    Strain: WBStrain00032821
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP2676
    Ortholog: WBGene00064646 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00159545 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
      WBGene00064647 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
      WBGene00029324 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      CSP21.g6726 Caenorhabditis parvicauda From_analysis: WormBase-Compara
    Paralog (116)
    Structured_description: Automated_description: Is affected by cyc-1; rsr-2; and prg-1 based on microarray and tiling array studies. Is predicted to encode a protein with the following domains: PAN-like domain and PAN-3 domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F54D12.7
    Corresponding_CDS_history: F54D12.7:wp114
      F54D12.7:wp125
      F54D12.7:wp175
      F54D12.7:wp274
    Corresponding_transcript: F54D12.7.1
    Associated_feature: WBsf986673
      WBsf1011543
  Experimental_info: Expr_pattern: Expr1012724
      Expr1152105
      Expr2004144
      Expr2022368
    Microarray_results: GPL14144_F54D12.7_553-612_0.877_15_A
      GPL19516_CGZ0023754
      GPL21109_F54D12.7
      GPL8673_F54D12_7P00188
      GPL8673_F54D12_7P00500
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00045217:prg-1_progressively_regulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00061527:clec-94-Y110A2AL.7
    Interaction (299)
  Map_info: Positive: Positive_clone: F54D12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -15.4668
  Method: Gene