WormBase Tree Display for Gene: WBGene00018814
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| WBGene00018814 | SMap | S_parent | Sequence | F54D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | F54D11.4 | |||||||
| Molecular_name | F54D11.4 | ||||||||
| F54D11.4.1 | |||||||||
| CE53087 | |||||||||
| Other_name | CELE_F54D11.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F54D11.4 | ||||||||
| DB_info | Database | AceView | gene | 5F95 | |||||
| WormQTL | gene | WBGene00018814 | |||||||
| WormFlux | gene | WBGene00018814 | |||||||
| NDB | locus_tag | CELE_F54D11.4 | |||||||
| NCBI | gene | 178852 | |||||||
| RefSeq | protein | NM_001276906.4 | |||||||
| TrEMBL | UniProtAcc | A0A486WXG9 | |||||||
| UniProt_GCRP | UniProtAcc | A0A486WXG9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 23 Jan 2012 16:48:45 | WBPerson1849 | Event | Acquires_merge | WBGene00018812 | ||||
| 3 | 11 Jun 2014 14:13:46 | WBPerson1983 | Event | Split_into | WBGene00018812 | ||||
| Acquires_merge | WBGene00018812 | ||||||||
| Split_into | WBGene00018812 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5563 | ||||||||
| Ortholog | WBGene00030510 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00030509 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| WBGene00058029 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00152013 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| WBGene00178463 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00219539 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_02224.g25506 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in germ line and germline precursor cell based on RNA-seq studies. Is affected by several genes including skn-1; pgl-1; and lin-39 based on RNA-seq; microarray; and proteomic studies. Is affected by four chemicals including Zidovudine; paraquat; and Chlorpyrifos based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54D11.4 | |||||||
| Corresponding_CDS_history | F54D11.4:wp230 | ||||||||
| F54D11.4a:wp231 | |||||||||
| F54D11.4a:wp271 | |||||||||
| Corresponding_transcript | F54D11.4.1 | ||||||||
| Other_sequence | CR07293 | ||||||||
| CBC01414_1 | |||||||||
| CRC09294_1 | |||||||||
| CR09862 | |||||||||
| CRC05914_1 | |||||||||
| Associated_feature | WBsf646764 | ||||||||
| WBsf999835 | |||||||||
| WBsf999836 | |||||||||
| WBsf999837 | |||||||||
| WBsf1019523 | |||||||||
| WBsf1019524 | |||||||||
| WBsf231675 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048297 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1016608 | ||||||||
| Expr1038115 | |||||||||
| Expr1152097 | |||||||||
| Expr2004140 | |||||||||
| Expr2022364 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (62) | |||||||||
| Interaction | WBInteraction000218287 | ||||||||
| WBInteraction000559806 | |||||||||
| WBInteraction000560107 | |||||||||
| WBInteraction000564851 | |||||||||
| WBInteraction000565448 | |||||||||
| WBInteraction000569040 | |||||||||
| WBInteraction000579076 | |||||||||
| Map_info | Positive | Positive_clone | F54D11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -4.9323 | |||||||
| Reference | WBPaper00027108 | ||||||||
| WBPaper00027634 | |||||||||
| Remark | [140610 pad] Gene history inconsistency in this object. Some of the history has been edited. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
