WormBase Tree Display for Gene: WBGene00018810
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| WBGene00018810 | SMap | S_parent | Sequence | F54D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54D10.9 | |||||||
| Molecular_name | F54D10.9 | ||||||||
| F54D10.9.1 | |||||||||
| CE54208 | |||||||||
| Other_name | CELE_F54D10.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F54D10.9 | ||||||||
| DB_info | Database | AceView | gene | 2E118 | |||||
| WormQTL | gene | WBGene00018810 | |||||||
| WormFlux | gene | WBGene00018810 | |||||||
| NDB | locus_tag | CELE_F54D10.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018810|UniProtKB=Q9TZ81 | |||||||
| family | PTHR47921 | ||||||||
| NCBI | gene | 186236 | |||||||
| RefSeq | protein | NM_001383814.2 | |||||||
| TREEFAM | TREEFAM_ID | TF320767 | |||||||
| TrEMBL | UniProtAcc | Q9TZ81 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TZ81 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (76) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00057439 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
| WBGene00145781 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| chrII_pilon.g4125 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (19) | |||||||||
| Structured_description | Automated_description | Enriched in RIH based on single-cell RNA-seq studies. Is affected by several genes including eat-2; pgl-1; and nhr-49 based on tiling array; RNA-seq; and microarray studies. Is affected by four chemicals including Atrazine; cadmium; and adsorbable organic bromine compound based on microarray studies. Is predicted to encode a protein with the following domains: Caenorhabditis protein of unknown function, DUF282 and Protein of unknown function DUF282, Caenorhabditis species. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54D10.9 | |||||||
| Corresponding_CDS_history | F54D10.9:wp274 | ||||||||
| F54D10.9:wp276 | |||||||||
| Corresponding_transcript | F54D10.9.1 | ||||||||
| Associated_feature | WBsf665440 | ||||||||
| WBsf987397 | |||||||||
| WBsf987398 | |||||||||
| WBsf1011973 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00103387 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048293 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015606 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012064 | ||||||||
| Expr1152093 | |||||||||
| Expr2004138 | |||||||||
| Expr2022362 | |||||||||
| Drives_construct | WBCnstr00026265 | ||||||||
| Construct_product | WBCnstr00026265 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (33) | |||||||||
| Interaction (44) | |||||||||
| Map_info | Positive | Positive_clone | F54D10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -6.2091 | |||||||
| Method | Gene |
