WormBase Tree Display for Gene: WBGene00018743

WBGene00018743 SMap: S_parent: Sequence: F53B3
  Identity: Version: 1
    Name: Sequence_name: F53B3.5
      Molecular_name: F53B3.5
        F53B3.5.1
        CE53648
      Other_name: CELE_F53B3.5 Accession_evidence: NDB BX284606
      Public_name: F53B3.5
    DB_info: Database: AceView gene XD492
        WormQTL gene WBGene00018743
        WormFlux gene WBGene00018743
        NDB locus_tag CELE_F53B3.5
        Panther gene CAEEL|WormBase=WBGene00018743|UniProtKB=Q20713
          family PTHR21215
        NCBI gene 180578
        RefSeq protein NM_076098.9
        TREEFAM TREEFAM_ID TF312994
        TrEMBL UniProtAcc Q20713
        UniProt_GCRP UniProtAcc Q20713
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (99)
    Strain: WBStrain00033199
    RNASeq_FPKM (74)
    GO_annotation: 00068860
      00123781
    Ortholog (32)
    Structured_description: Concise_description: F53B3.5 encodes a claudin homolog that may regulate ion channels; F53B3.5 is distantly similar to mammalian voltage-dependent calcium channel gamma subunits that are known or suspected to prevent epilepsy in vivo (e.g., stargazin; MGI:1316660); F53B3.5 has no obvious function in mass RNAi assays; claudins are integral membrane proteins with four transmembrane sequences that are found in mammalian tight junctions (TJs), induce TJs when transgenically expressed in cells normally lacking them, and can mediate the specific conductance of of specific ions (e.g., magnesium or calcium) through TJs while blocking the flow of water. Paper_evidence: WBPaper00004961
            WBPaper00005654
            WBPaper00005946
            WBPaper00005975
            WBPaper00012762
            WBPaper00012856
            WBPaper00012941
            WBPaper00013626
            WBPaper00018356
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F53B3.5
    Corresponding_CDS_history: F53B3.5:wp230
      F53B3.5:wp272
    Corresponding_transcript: F53B3.5.1
    Other_sequence (12)
    Associated_feature (21)
  Experimental_info: RNAi_result: WBRNAi00094877 Inferred_automatically: RNAi_primary
      WBRNAi00015483 Inferred_automatically: RNAi_primary
      WBRNAi00048085 Inferred_automatically: RNAi_primary
      WBRNAi00033498 Inferred_automatically: RNAi_primary
      WBRNAi00015482 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014430
      Expr1038071
      Expr1151895
      Expr2004038
      Expr2022261
    Microarray_results (22)
    Expression_cluster (259)
    Interaction: WBInteraction000140382
      WBInteraction000151309
      WBInteraction000239730
      WBInteraction000242136
      WBInteraction000244284
      WBInteraction000246280
      WBInteraction000248548
      WBInteraction000252352
      WBInteraction000255076
      WBInteraction000256003
      WBInteraction000259785
      WBInteraction000268253
      WBInteraction000271424
      WBInteraction000271613
      WBInteraction000280248
      WBInteraction000282839
      WBInteraction000283594
      WBInteraction000284934
      WBInteraction000289333
      WBInteraction000293234
      WBInteraction000297160
      WBInteraction000298625
      WBInteraction000300170
      WBInteraction000300328
      WBInteraction000302879
      WBInteraction000306708
      WBInteraction000308747
      WBInteraction000313129
      WBInteraction000314152
      WBInteraction000314339
      WBInteraction000319476
      WBInteraction000319500
      WBInteraction000319911
      WBInteraction000331083
      WBInteraction000333739
      WBInteraction000334892
      WBInteraction000338302
      WBInteraction000339459
      WBInteraction000340042
      WBInteraction000340362
      WBInteraction000340511
      WBInteraction000347081
      WBInteraction000350118
      WBInteraction000350187
      WBInteraction000350923
      WBInteraction000351964
      WBInteraction000355533
      WBInteraction000357340
      WBInteraction000365637
      WBInteraction000370038
      WBInteraction000373676
      WBInteraction000377818
      WBInteraction000380577
      WBInteraction000382443
      WBInteraction000386874
      WBInteraction000387461
      WBInteraction000388583
      WBInteraction000389929
      WBInteraction000392233
      WBInteraction000400305
      WBInteraction000400879
      WBInteraction000401807
      WBInteraction000401856
      WBInteraction000402999
      WBInteraction000406033
      WBInteraction000406743
      WBInteraction000410005
      WBInteraction000412098
      WBInteraction000412702
      WBInteraction000413342
      WBInteraction000415616
      WBInteraction000421053
      WBInteraction000421344
      WBInteraction000424658
      WBInteraction000425164
      WBInteraction000431115
      WBInteraction000432924
      WBInteraction000433645
      WBInteraction000434244
      WBInteraction000434364
      WBInteraction000437229
      WBInteraction000439760
      WBInteraction000442116
      WBInteraction000444247
      WBInteraction000446876
      WBInteraction000447295
      WBInteraction000451318
      WBInteraction000457555
      WBInteraction000460244
      WBInteraction000461989
      WBInteraction000521076
      WBInteraction000548200
      WBInteraction000559304
      WBInteraction000581953
  Map_info: Positive: Positive_clone: F53B3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -12.6849
  Method: Gene