WormBase Tree Display for Gene: WBGene00018675
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| WBGene00018675 | SMap | S_parent | Sequence | F52C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F52C9.5 | |||||||
| Molecular_name | F52C9.5 | ||||||||
| F52C9.5.1 | |||||||||
| CE54167 | |||||||||
| Other_name | CELE_F52C9.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | F52C9.5 | ||||||||
| DB_info | Database | AceView | gene | 3G395 | |||||
| WormQTL | gene | WBGene00018675 | |||||||
| WormFlux | gene | WBGene00018675 | |||||||
| NDB | locus_tag | CELE_F52C9.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018675|UniProtKB=Q10125 | |||||||
| family | PTHR47327 | ||||||||
| NCBI | gene | 186097 | |||||||
| RefSeq | protein | NM_001379706.1 | |||||||
| SwissProt | UniProtAcc | Q10125 | |||||||
| TREEFAM | TREEFAM_ID | TF321203 | |||||||
| UniProt_GCRP | UniProtAcc | Q10125 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (51) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (38) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Enriched in accessory cell; anterior hypodermis; head mesodermal cell; and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; rrf-3; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by eleven chemicals including stavudine; Zidovudine; and Sodium Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: PAN domain and PAN/Apple domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F52C9.5 | |||||||
| Corresponding_CDS_history | F52C9.5:wp130 | ||||||||
| F52C9.5:wp146 | |||||||||
| F52C9.5:wp275 | |||||||||
| Corresponding_transcript | F52C9.5.1 | ||||||||
| Other_sequence | Tcol_isotig16785 | ||||||||
| Dviv_isotig17707 | |||||||||
| JI468436.1 | |||||||||
| HGC06522_1 | |||||||||
| JI177133.1 | |||||||||
| HG06344 | |||||||||
| Dviv_isotig17706 | |||||||||
| Associated_feature | WBsf658931 | ||||||||
| WBsf224911 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015388 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032600 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047951 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005571 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011558 | ||||||||
| Expr1038038 | |||||||||
| Expr1151774 | |||||||||
| Expr2003985 | |||||||||
| Expr2022206 | |||||||||
| Drives_construct | WBCnstr00026344 | ||||||||
| Construct_product | WBCnstr00026344 | ||||||||
| WBCnstr00040348 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction | WBInteraction000140819 | ||||||||
| WBInteraction000298692 | |||||||||
| WBInteraction000381303 | |||||||||
| WBInteraction000423319 | |||||||||
| WBInteraction000429463 | |||||||||
| Map_info | Positive | Positive_clone | F52C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.83918 | |||||||
| Method | Gene |
