WormBase Tree Display for Gene: WBGene00018563
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| WBGene00018563 | SMap | S_parent | Sequence | F47D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F47D12.7 | |||||||
| Molecular_name | F47D12.7 | ||||||||
| F47D12.7.1 | |||||||||
| CE01951 | |||||||||
| Other_name | CELE_F47D12.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | F47D12.7 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (35) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including AVK; amphid sheath cell; anterior ganglion (post); germ line; and hyp3 based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty-one chemicals including Heme; Ethanol; and nicotinic acid based on microarray and RNA-seq studies. Human ortholog(s) of this gene implicated in spermatogenic failure 11. Is predicted to encode a protein with the following domains: Kelch-type beta propeller; BTB And C-terminal Kelch; Kelch motif; SKP1/BTB/POZ domain superfamily; Kelch repeat type 1; BTB-kelch protein; BTB/POZ domain; and BTB/Kelch-associated. Is an ortholog of human KLHL10 (kelch like family member 10). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070180 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18829) | ||||
| Molecular_info | Corresponding_CDS | F47D12.7 | |||||||
| Corresponding_CDS_history | F47D12.7:wp202 | ||||||||
| Corresponding_transcript | F47D12.7.1 | ||||||||
| Other_sequence | CRC06762_1 | ||||||||
| CBC04450_1 | |||||||||
| CBC07760_1 | |||||||||
| Associated_feature | WBsf992701 | ||||||||
| WBsf992702 | |||||||||
| WBsf992703 | |||||||||
| WBsf1015060 | |||||||||
| WBsf1015061 | |||||||||
| WBsf226801 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015189 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005936 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032439 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047650 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010189 | ||||||||
| Expr1151490 | |||||||||
| Expr2003852 | |||||||||
| Expr2022075 | |||||||||
| Drives_construct | WBCnstr00026417 | ||||||||
| Construct_product | WBCnstr00026417 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (197) | |||||||||
| Interaction (144) | |||||||||
| Map_info | Positive | Positive_clone | F47D12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.40091 | |||||||
| Reference | WBPaper00055090 | ||||||||
| Method | Gene |
