WormBase Tree Display for Gene: WBGene00018527
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WBGene00018527 | SMap | S_parent | Sequence | F47B3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F47B3.3 | |||||||
Molecular_name | F47B3.3 | ||||||||
F47B3.3.1 | |||||||||
CE53690 | |||||||||
Other_name | CELE_F47B3.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | F47B3.3 | ||||||||
DB_info | Database | AceView | gene | 1E531 | |||||
WormQTL | gene | WBGene00018527 | |||||||
WormFlux | gene | WBGene00018527 | |||||||
NDB | locus_tag | CELE_F47B3.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018527|UniProtKB=P83387 | |||||||
family | PTHR22776 | ||||||||
NCBI | gene | 185886 | |||||||
RefSeq | protein | NM_001375254.1 | |||||||
TREEFAM | TREEFAM_ID | TF320945 | |||||||
TrEMBL | UniProtAcc | P83387 | |||||||
UniProt_GCRP | UniProtAcc | P83387 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele | WBVar01499786 | ||||||||
WBVar01499985 | |||||||||
WBVar01498959 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00048829 | ||||||||
00048830 | |||||||||
00048831 | |||||||||
00048832 | |||||||||
00048833 | |||||||||
00123644 | |||||||||
Ortholog (41) | |||||||||
Paralog | WBGene00008401 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00009741 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00010567 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00010727 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00016599 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00017909 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019780 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Human ortholog(s) of this gene implicated in schizophrenia. Is an ortholog of human PLLP (plasmolipin). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:5419 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18553) | ||||
Molecular_info | Corresponding_CDS | F47B3.3 | |||||||
Corresponding_CDS_history | F47B3.3:wp273 | ||||||||
Corresponding_transcript | F47B3.3.1 | ||||||||
Other_sequence | MI03802 | ||||||||
DAC01273_1 | |||||||||
Associated_feature | WBsf217460 | ||||||||
Experimental_info | RNAi_result | WBRNAi00003691 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003522 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00091338 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045869 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1151441 | ||||||||
Expr2003831 | |||||||||
Expr2022051 | |||||||||
Drives_construct | WBCnstr00026445 | ||||||||
Construct_product | WBCnstr00026445 | ||||||||
Microarray_results (22) | |||||||||
Expression_cluster (59) | |||||||||
Interaction | WBInteraction000187199 | ||||||||
WBInteraction000336194 | |||||||||
WBInteraction000411622 | |||||||||
WBInteraction000441718 | |||||||||
WBInteraction000447474 | |||||||||
Map_info | Positive | Positive_clone | F47B3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | -1.90081 | |||||||
Reference (2) | |||||||||
Method | Gene |