WormBase Tree Display for Gene: WBGene00018513
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| WBGene00018513 | SMap | S_parent | Sequence | F46F11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | trmt-10C.1 | Author_evidence | WBPerson2192 | |||||
| Sequence_name | F46F11.10 | ||||||||
| Molecular_name | F46F11.10 | ||||||||
| F46F11.10.1 | |||||||||
| CE39100 | |||||||||
| Other_name | CELE_F46F11.10 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | trmt-10C.1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Jul 2023 23:47:10 | WBPerson51134 | Name_change | CGC_name | trmt-10C.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | trmt | ||||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00091396 | ||||||||
| 00091397 | |||||||||
| 00091398 | |||||||||
| 00091399 | |||||||||
| 00091400 | |||||||||
| 00091401 | |||||||||
| 00091402 | |||||||||
| 00091403 | |||||||||
| 00091404 | |||||||||
| 00091405 | |||||||||
| Contained_in_operon | CEOP1272 | ||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00009131 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00016978 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable tRNA (guanine-N1-)-methyltransferase activity and tRNA binding activity. Predicted to be involved in mitochondrial tRNA 5'-end processing and positive regulation of mitochondrial translation. Predicted to be located in mitochondrion and nucleoplasm. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 30. Is an ortholog of human TRMT10C (tRNA methyltransferase 10C, mitochondrial RNase P subunit). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111471 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26022) | ||||
| Molecular_info | Corresponding_CDS | F46F11.10 | |||||||
| Corresponding_CDS_history | F46F11.10:wp148 | ||||||||
| Corresponding_transcript | F46F11.10.1 | ||||||||
| Other_sequence | JI176124.1 | ||||||||
| Acan_isotig18182 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003688 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003687 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047529 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023080 | ||||||||
| Expr1151369 | |||||||||
| Expr2003798 | |||||||||
| Expr2022018 | |||||||||
| Drives_construct | WBCnstr00026457 | ||||||||
| Construct_product | WBCnstr00026457 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (92) | |||||||||
| Interaction | WBInteraction000239624 | ||||||||
| WBInteraction000581064 | |||||||||
| Map_info | Positive | Positive_clone | F46F11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 0.278304 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
