WormBase Tree Display for Gene: WBGene00018472
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| WBGene00018472 | SMap | S_parent | Sequence | F45E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nep-16 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F45E4.7 | ||||||||
| Molecular_name | F45E4.7a | ||||||||
| F45E4.7a.1 | |||||||||
| CE37644 | |||||||||
| F45E4.7b | |||||||||
| CE33648 | |||||||||
| F45E4.7c | |||||||||
| CE37645 | |||||||||
| F45E4.7b.1 | |||||||||
| F45E4.7c.1 | |||||||||
| Other_name | CELE_F45E4.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | nep-16 | ||||||||
| DB_info | Database | AceView | gene | 4I400 | |||||
| WormQTL | gene | WBGene00018472 | |||||||
| WormFlux | gene | WBGene00018472 | |||||||
| NDB | locus_tag | CELE_F45E4.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018472|UniProtKB=H2KYL1 | |||||||
| family | PTHR11733 | ||||||||
| NCBI | gene | 177541 | |||||||
| RefSeq | protein | NM_001028032.7 | |||||||
| NM_001028034.5 | |||||||||
| NM_001383127.2 | |||||||||
| TrEMBL | UniProtAcc | H2KYL1 | |||||||
| Q86MG1 | |||||||||
| H2KYL2 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KYL1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Feb 2012 15:49:10 | WBPerson2970 | Name_change | CGC_name | nep-16 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nep | ||||||||
| Allele (71) | |||||||||
| Strain | WBStrain00032231 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00021718 | ||||||||
| 00021719 | |||||||||
| 00021720 | |||||||||
| 00123589 | |||||||||
| 00123590 | |||||||||
| 00123591 | |||||||||
| Ortholog (46) | |||||||||
| Paralog (22) | |||||||||
| Structured_description | Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in protein processing. Predicted to be located in plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F45E4.7a | |||||||
| F45E4.7b | |||||||||
| F45E4.7c | |||||||||
| Corresponding_CDS_history | F45E4.7:wp97 | ||||||||
| F45E4.7a:wp105 | |||||||||
| F45E4.7a:wp150 | |||||||||
| F45E4.7c:wp150 | |||||||||
| Corresponding_transcript | F45E4.7a.1 | ||||||||
| F45E4.7b.1 | |||||||||
| F45E4.7c.1 | |||||||||
| Other_sequence | HBC15480_1 | ||||||||
| ES410644.1 | |||||||||
| Associated_feature | WBsf651934 | ||||||||
| WBsf651935 | |||||||||
| WBsf651936 | |||||||||
| WBsf997024 | |||||||||
| WBsf997025 | |||||||||
| WBsf1017745 | |||||||||
| WBsf1017746 | |||||||||
| WBsf230303 | |||||||||
| WBsf230304 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047412 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047411 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032307 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00073094 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025367 | ||||||||
| Expr1037960 | |||||||||
| Expr1151254 | |||||||||
| Expr2013961 | |||||||||
| Expr2032200 | |||||||||
| Drives_construct | WBCnstr00026492 | ||||||||
| Construct_product | WBCnstr00026492 | ||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (149) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Map | IV | Position | 3.3691 | |||||
| Positive | Positive_clone | F45E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
