WormBase Tree Display for Gene: WBGene00018430
expand all nodes | collapse all nodes | view schema
| WBGene00018430 | SMap | S_parent | Sequence | F44E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-142 | Person_evidence | WBPerson600 | |||||
| Sequence_name | F44E7.8 | ||||||||
| Molecular_name | F44E7.8a | ||||||||
| F44E7.8a.1 | |||||||||
| CE35972 | |||||||||
| F44E7.8b | |||||||||
| CE47778 | |||||||||
| F44E7.8b.1 | |||||||||
| Other_name | CELE_F44E7.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-142 | ||||||||
| DB_info | Database | AceView | gene | 5G266 | |||||
| WormQTL | gene | WBGene00018430 | |||||||
| WormFlux | gene | WBGene00018430 | |||||||
| NDB | locus_tag | CELE_F44E7.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018430|UniProtKB=J7SF93 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 185740 | |||||||
| RefSeq | protein | NM_072117.5 | |||||||
| NM_001276907.4 | |||||||||
| TrEMBL | UniProtAcc | Q8MXK0 | |||||||
| J7SF93 | |||||||||
| UniProt_GCRP | UniProtAcc | J7SF93 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:11 | WBPerson2970 | Name_change | CGC_name | nhr-142 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (90) | |||||||||
| Strain | WBStrain00036680 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024026 | ||||||||
| 00024027 | |||||||||
| 00024028 | |||||||||
| 00024029 | |||||||||
| 00123578 | |||||||||
| 00123579 | |||||||||
| 00123580 | |||||||||
| 00123581 | |||||||||
| Ortholog (39) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F44E7.8a | |||||||
| F44E7.8b | |||||||||
| Corresponding_CDS_history | F44E7.8:wp107 | ||||||||
| F44E7.8:wp112 | |||||||||
| Corresponding_transcript | F44E7.8a.1 | ||||||||
| F44E7.8b.1 | |||||||||
| Other_sequence | FK805104.1 | ||||||||
| Dviv_isotig19448 | |||||||||
| Tcol_isotig05351 | |||||||||
| Tcol_isotig15592 | |||||||||
| CJC02333_1 | |||||||||
| Acan_isotig17016 | |||||||||
| Tcir_isotig07624 | |||||||||
| Tcol_isotig05352 | |||||||||
| Associated_feature | WBsf1000087 | ||||||||
| WBsf1019687 | |||||||||
| WBsf233725 | |||||||||
| WBsf233726 | |||||||||
| Transcription_factor | WBTranscriptionFactor000670 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00047305 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047298 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014946 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115832 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047306 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00084681 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027720 | ||||||||
| Expr1151161 | |||||||||
| Expr2014043 | |||||||||
| Expr2032283 | |||||||||
| Drives_construct | WBCnstr00026522 | ||||||||
| Construct_product | WBCnstr00026522 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (70) | |||||||||
| Map_info | Map | V | Position | -0.963554 | Error | 0.012883 | |||
| Positive | Positive_clone | F44E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00050371 | |||||||||
| WBPaper00062515 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
