WormBase Tree Display for Gene: WBGene00018376
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| WBGene00018376 | SMap | S_parent | Sequence | F43C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F43C9.2 | |||||||
| Molecular_name | F43C9.2a | ||||||||
| F43C9.2a.1 | |||||||||
| CE29319 | |||||||||
| F43C9.2b | |||||||||
| CE52539 | |||||||||
| F43C9.2c | |||||||||
| CE52501 | |||||||||
| F43C9.2b.1 | |||||||||
| F43C9.2c.1 | |||||||||
| Other_name | CELE_F43C9.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F43C9.2 | ||||||||
| DB_info | Database | AceView | gene | XF407 | |||||
| WormQTL | gene | WBGene00018376 | |||||||
| WormFlux | gene | WBGene00018376 | |||||||
| NDB | locus_tag | CELE_F43C9.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018376|UniProtKB=Q20358 | |||||||
| family | PTHR23050 | ||||||||
| NCBI | gene | 180753 | |||||||
| RefSeq | protein | NM_076417.7 | |||||||
| NM_001361801.1 | |||||||||
| NM_001361802.4 | |||||||||
| TrEMBL | UniProtAcc | Q20358 | |||||||
| A0A2K5AU04 | |||||||||
| A0A2K5AU12 | |||||||||
| UniProt_GCRP | UniProtAcc | Q20358 | |||||||
| OMIM | gene | 191039 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (111) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003161 | ||||||||
| 00003162 | |||||||||
| 00123510 | |||||||||
| Ortholog (36) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity and enzyme regulator activity. Human ortholog(s) of this gene implicated in congenital myopathy 15. Is an ortholog of human TNNC2 (troponin C2, fast skeletal type). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081347 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11944) | ||||
| Molecular_info | Corresponding_CDS | F43C9.2a | |||||||
| F43C9.2b | |||||||||
| F43C9.2c | |||||||||
| Corresponding_transcript | F43C9.2a.1 | ||||||||
| F43C9.2b.1 | |||||||||
| F43C9.2c.1 | |||||||||
| Other_sequence (44) | |||||||||
| Associated_feature | WBsf648041 | ||||||||
| WBsf716854 | |||||||||
| WBsf1005070 | |||||||||
| WBsf1005071 | |||||||||
| WBsf1005072 | |||||||||
| WBsf1005073 | |||||||||
| WBsf1005074 | |||||||||
| WBsf1022849 | |||||||||
| WBsf235626 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076419 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047179 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014873 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027472 | ||||||||
| Expr1151041 | |||||||||
| Expr2003671 | |||||||||
| Expr2021889 | |||||||||
| Drives_construct | WBCnstr00026568 | ||||||||
| Construct_product | WBCnstr00026568 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (198) | |||||||||
| Interaction | WBInteraction000290547 | ||||||||
| WBInteraction000327631 | |||||||||
| WBInteraction000395231 | |||||||||
| Map_info | Positive | Positive_clone | F43C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -6.39554 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060275 | |||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
