WormBase Tree Display for Gene: WBGene00018300
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WBGene00018300 | SMap | S_parent | Sequence | F41G3 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | F41G3.3 | |||||
Molecular_name | F41G3.3a | ||||||
F41G3.3a.1 | |||||||
CE52400 | |||||||
F41G3.3b | |||||||
CE54217 | |||||||
F41G3.3b.1 | |||||||
Other_name | CELE_F41G3.3 | Accession_evidence | NDB | BX284602 | |||
Public_name | F41G3.3 | ||||||
DB_info | Database | AceView | gene | 2H49 | |||
WormQTL | gene | WBGene00018300 | |||||
WormFlux | gene | WBGene00018300 | |||||
NDB | locus_tag | CELE_F41G3.3 | |||||
NCBI | gene | 174113 | |||||
RefSeq | protein | NM_062981.4 | |||||
NM_062982.6 | |||||||
TrEMBL | UniProtAcc | Q20292 | |||||
A0A6V7QYP1 | |||||||
UniProt_GCRP | UniProtAcc | A0A6V7QYP1 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (91) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (27) | |||||||
Structured_description | Automated_description | Enriched in g2L; g2R; pharyngeal-intestinal valve; pm6; and pm7 based on single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on tiling array; microarray; RNA-seq; and proteomic studies. Is affected by seventeen chemicals including methylmercuric chloride; stavudine; and Zidovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F41G3.3a | |||||
F41G3.3b | |||||||
Corresponding_CDS_history | F41G3.3:wp261 | ||||||
Corresponding_transcript | F41G3.3a.1 | ||||||
F41G3.3b.1 | |||||||
Other_sequence | MH01352 | ||||||
CJC01780_1 | |||||||
Associated_feature | WBsf644322 | ||||||
WBsf988241 | |||||||
WBsf988242 | |||||||
WBsf988243 | |||||||
WBsf1012419 | |||||||
Experimental_info | RNAi_result | WBRNAi00014769 | Inferred_automatically | RNAi_primary | |||
WBRNAi00047022 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047021 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014770 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1013187 | ||||||
Expr1021741 | |||||||
Expr1037881 | |||||||
Expr1037882 | |||||||
Expr1150889 | |||||||
Expr1150892 | |||||||
Expr2003605 | |||||||
Expr2003606 | |||||||
Expr2021823 | |||||||
Expr2021824 | |||||||
Drives_construct | WBCnstr00026627 | ||||||
Construct_product | WBCnstr00026627 | ||||||
Microarray_results (38) | |||||||
Expression_cluster (139) | |||||||
SAGE_tag | SAGE:catttgaggttggtaag | Strand | Antisense | ||||
SAGE:atcatcgttcacaagac | Strand | Sense | |||||
Unambiguously_mapped | |||||||
SAGE:atcttccgga | Strand | Antisense | |||||
SAGE:gatatgacgatgaagag | Strand | Sense | |||||
Unambiguously_mapped | |||||||
SAGE:aggaagagcacacaagt | Strand | Sense | |||||
Unambiguously_mapped | |||||||
SAGE:acttttgtca | Strand | Antisense | |||||
SAGE:tttaaaatcgcgtcatt | Strand | Sense | |||||
Unambiguously_mapped | |||||||
SAGE:agagcaaatcaacaaca | Strand | Sense | |||||
Unambiguously_mapped | |||||||
SAGE:caccaaagtt | Strand | Antisense | |||||
SAGE:atcatcgttc | Strand | Sense | |||||
Unambiguously_mapped | |||||||
Interaction (13) | |||||||
Map_info | Positive | Positive_clone | F41G3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | II | 0.0855938 | |||||
Reference | WBPaper00034471 | ||||||
WBPaper00064898 | |||||||
Method | Gene |