WormBase Tree Display for Gene: WBGene00018289
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| WBGene00018289 | SMap | S_parent | Sequence | F41E6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F41E6.8 | |||||||
| Molecular_name | F41E6.8 | ||||||||
| F41E6.8.1 | |||||||||
| CE52258 | |||||||||
| Other_name | CELE_F41E6.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F41E6.8 | ||||||||
| DB_info | Database | AceView | gene | 5J80 | |||||
| WormQTL | gene | WBGene00018289 | |||||||
| WormFlux | gene | WBGene00018289 | |||||||
| NDB | locus_tag | CELE_F41E6.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018289|UniProtKB=O16456 | |||||||
| family | PTHR47921 | ||||||||
| NCBI | gene | 185619 | |||||||
| RefSeq | protein | NM_001356708.2 | |||||||
| TREEFAM | TREEFAM_ID | TF320767 | |||||||
| TrEMBL | UniProtAcc | O16456 | |||||||
| UniProt_GCRP | UniProtAcc | O16456 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (32) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Automated_description | Enriched in PLM; hyp4; hyp5; hyp6; and ventral cord blast cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and rrf-3 based on tiling array; RNA-seq; and microarray studies. Is affected by five chemicals including multi-walled carbon nanotube; antimycin; and glycine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Caenorhabditis protein of unknown function, DUF282 and Protein of unknown function DUF282, Caenorhabditis species. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F41E6.8 | |||||||
| Corresponding_CDS_history | F41E6.8:wp261 | ||||||||
| Corresponding_transcript | F41E6.8.1 | ||||||||
| Other_sequence | Tcol_isotig08716 | ||||||||
| FG349354.1 | |||||||||
| EX915842.1 | |||||||||
| Tcol_isotig08715 | |||||||||
| FG350938.1 | |||||||||
| HBC11349_1 | |||||||||
| FG580873.1 | |||||||||
| Name_isotig09217 | |||||||||
| Associated_feature | WBsf652856 | ||||||||
| WBsf669176 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046998 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014751 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028285 | ||||||||
| Expr1150862 | |||||||||
| Expr2003592 | |||||||||
| Expr2021811 | |||||||||
| Drives_construct | WBCnstr00026635 | ||||||||
| Construct_product | WBCnstr00026635 | ||||||||
| Microarray_results | SMD_F41E6.8 | ||||||||
| 181409_at | |||||||||
| Aff_F41E6.8 | |||||||||
| GPL14144_F41E6.8_137-196_0.918_1_A | |||||||||
| GPL19516_CGZ0021044 | |||||||||
| GPL21109_F41E6.8 | |||||||||
| GPL8673_F41E6_8P00163 | |||||||||
| GPL8673_F41E6_8P00176 | |||||||||
| GPL8673_F41E6_8P00334 | |||||||||
| Expression_cluster (73) | |||||||||
| Interaction | WBInteraction000263363 | ||||||||
| WBInteraction000279888 | |||||||||
| WBInteraction000307965 | |||||||||
| WBInteraction000344770 | |||||||||
| WBInteraction000345123 | |||||||||
| WBInteraction000349780 | |||||||||
| WBInteraction000418354 | |||||||||
| WBInteraction000433202 | |||||||||
| WBInteraction000434899 | |||||||||
| Map_info | Positive | Positive_clone | F41E6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 1.48316 | |||||||
| Reference | WBPaper00060662 | ||||||||
| Method | Gene |
