WormBase Tree Display for Gene: WBGene00018240
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| WBGene00018240 | SMap | S_parent | Sequence | F40G9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cox-17 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F40G9.2 | ||||||||
| Molecular_name | F40G9.2 | ||||||||
| F40G9.2.1 | |||||||||
| CE19849 | |||||||||
| Other_name | CELE_F40G9.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | cox-17 | ||||||||
| DB_info | Database | AceView | gene | 3A809 | |||||
| WormQTL | gene | WBGene00018240 | |||||||
| WormFlux | gene | WBGene00018240 | |||||||
| NDB | locus_tag | CELE_F40G9.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018240|UniProtKB=Q9TZ68 | |||||||
| family | PTHR16719 | ||||||||
| NCBI | gene | 175186 | |||||||
| RefSeq | protein | NM_064774.5 | |||||||
| TREEFAM | TREEFAM_ID | TF105074 | |||||||
| TrEMBL | UniProtAcc | Q9TZ68 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TZ68 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 Jan 2013 14:30:54 | WBPerson2970 | Name_change | CGC_name | cox-17 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cox | ||||||||
| Allele | WBVar01706278 | ||||||||
| WBVar00795619 | |||||||||
| WBVar00795620 | |||||||||
| WBVar00795621 | |||||||||
| WBVar00795622 | |||||||||
| WBVar00795623 | |||||||||
| WBVar00795624 | |||||||||
| WBVar01912508 | |||||||||
| WBVar01912509 | |||||||||
| WBVar00795625 | |||||||||
| WBVar01500082 | |||||||||
| WBVar01768068 | |||||||||
| WBVar01478946 | |||||||||
| WBVar01498832 | |||||||||
| WBVar02102078 | |||||||||
| WBVar01951002 | |||||||||
| WBVar02029798 | |||||||||
| WBVar02029799 | |||||||||
| WBVar02101206 | |||||||||
| WBVar02101207 | |||||||||
| WBVar02122373 | |||||||||
| WBVar01699020 | |||||||||
| WBVar01699021 | |||||||||
| WBVar01699022 | |||||||||
| WBVar00028903 | |||||||||
| WBVar01699023 | |||||||||
| WBVar01699024 | |||||||||
| WBVar01699025 | |||||||||
| WBVar01699026 | |||||||||
| WBVar00092984 | |||||||||
| WBVar00387423 | |||||||||
| WBVar00387424 | |||||||||
| WBVar00387425 | |||||||||
| WBVar00387426 | |||||||||
| WBVar00387427 | |||||||||
| WBVar00795618 | |||||||||
| Strain | WBStrain00003229 | ||||||||
| WBStrain00037516 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097839 | ||||||||
| 00097840 | |||||||||
| 00097841 | |||||||||
| 00097842 | |||||||||
| 00097843 | |||||||||
| 00123424 | |||||||||
| 00123425 | |||||||||
| 00123426 | |||||||||
| Contained_in_operon | CEOP3016 | ||||||||
| Ortholog (11) | |||||||||
| Structured_description | Automated_description | Predicted to enable copper chaperone activity. Predicted to be involved in mitochondrial cytochrome c oxidase assembly. Predicted to be located in mitochondrial intermembrane space. Is an ortholog of human COX17 (cytochrome c oxidase copper chaperone COX17). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40G9.2 | |||||||
| Corresponding_transcript | F40G9.2.1 | ||||||||
| Other_sequence | PPC05782_1 | ||||||||
| Associated_feature | WBsf991003 | ||||||||
| WBsf991004 | |||||||||
| WBsf991005 | |||||||||
| WBsf224347 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032053 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000666 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006781 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046909 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1628 | ||||||||
| Expr6018 | |||||||||
| Expr1017197 | |||||||||
| Expr1150779 | |||||||||
| Expr2010473 | |||||||||
| Expr2028713 | |||||||||
| Drives_construct | WBCnstr00003704 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (140) | |||||||||
| Interaction (31) | |||||||||
| Map_info | Map | III | Position | -26.92 | |||||
| Positive | Positive_clone | F40G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
