WormBase Tree Display for Gene: WBGene00018214
expand all nodes | collapse all nodes | view schema
| WBGene00018214 | SMap | S_parent | Sequence | F39H12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F39H12.3 | |||||||
| Molecular_name | F39H12.3 | ||||||||
| F39H12.3.1 | |||||||||
| CE40651 | |||||||||
| Other_name | CELE_F39H12.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F39H12.3 | ||||||||
| DB_info | Database | AceView | gene | XB456 | |||||
| WormQTL | gene | WBGene00018214 | |||||||
| WormFlux | gene | WBGene00018214 | |||||||
| NDB | locus_tag | CELE_F39H12.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018214|UniProtKB=Q20199 | |||||||
| family | PTHR10699 | ||||||||
| NCBI | gene | 185505 | |||||||
| RefSeq | protein | NM_075764.7 | |||||||
| TREEFAM | TREEFAM_ID | TF316153 | |||||||
| TrEMBL | UniProtAcc | Q20199 | |||||||
| UniProt_GCRP | UniProtAcc | Q20199 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (44) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067479 | ||||||||
| Ortholog (29) | |||||||||
| Structured_description | Automated_description | Predicted to enable calmodulin binding activity. Human ortholog(s) of this gene implicated in Merkel cell carcinoma. Is an ortholog of human SPA17 (sperm autoantigenic protein 17). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3965 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11210) | ||||
| Molecular_info | Corresponding_CDS | F39H12.3 | |||||||
| Corresponding_CDS_history | F39H12.3:wp169 | ||||||||
| Corresponding_transcript | F39H12.3.1 | ||||||||
| Other_sequence (46) | |||||||||
| Associated_feature | WBsf718497 | ||||||||
| WBsf1003874 | |||||||||
| WBsf236966 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014616 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046800 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021820 | ||||||||
| Expr1037842 | |||||||||
| Expr1150675 | |||||||||
| Expr2003511 | |||||||||
| Expr2021726 | |||||||||
| Drives_construct | WBCnstr00026694 | ||||||||
| Construct_product | WBCnstr00026694 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (147) | |||||||||
| Interaction | WBInteraction000426099 | ||||||||
| WBInteraction000568148 | |||||||||
| WBInteraction000568337 | |||||||||
| Map_info | Positive | Positive_clone | F39H12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -19.4857 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
