WormBase Tree Display for Gene: WBGene00018195
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WBGene00018195 | SMap | S_parent | Sequence | F39E9 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | btb-16 | Person_evidence | WBPerson261 | |||
Sequence_name | F39E9.2 | ||||||
Molecular_name | F39E9.2 | ||||||
F39E9.2.1 | |||||||
CE32655 | |||||||
Other_name | CELE_F39E9.2 | Accession_evidence | NDB | BX284602 | |||
Public_name | btb-16 | ||||||
DB_info | Database | AceView | gene | 2D587 | |||
WormQTL | gene | WBGene00018195 | |||||
WormFlux | gene | WBGene00018195 | |||||
NDB | locus_tag | CELE_F39E9.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00018195|UniProtKB=O17112 | |||||
family | PTHR22744 | ||||||
NCBI | gene | 173674 | |||||
RefSeq | protein | NM_062098.6 | |||||
TREEFAM | TREEFAM_ID | TF322195 | |||||
TrEMBL | UniProtAcc | O17112 | |||||
UniProt_GCRP | UniProtAcc | O17112 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | btb | ||||||
Allele (75) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (152) | |||||||
Paralog (29) | |||||||
Structured_description | Automated_description | Enriched in several structures, including ABarppaapp; ABarpppapp; dopaminergic neurons; head mesodermal cell; and mechanosensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by twenty chemicals including Tunicamycin; mianserin; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F39E9.2 | |||||
Corresponding_CDS_history | F39E9.2:wp88 | ||||||
Corresponding_transcript | F39E9.2.1 | ||||||
Other_sequence | CR01799 | ||||||
CRC03531_1 | |||||||
Associated_feature (2) | |||||||
Experimental_info | RNAi_result | WBRNAi00046776 | Inferred_automatically | RNAi_primary | |||
WBRNAi00014601 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00097119 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1150651 | ||||||
Expr2009665 | |||||||
Expr2027904 | |||||||
Drives_construct | WBCnstr00026708 | ||||||
Construct_product | WBCnstr00026708 | ||||||
Microarray_results (13) | |||||||
Expression_cluster (241) | |||||||
Interaction (155) | |||||||
Map_info | Map | II | Position | -6.84748 | Error | 0.016437 | |
Positive | Positive_clone | F39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00065331 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |