WormBase Tree Display for Gene: WBGene00018195
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WBGene00018195 | SMap | S_parent | Sequence | F39E9 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | btb | ||||||
Allele (75) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (152) | |||||||
Paralog (29) | |||||||
Structured_description | Automated_description | Enriched in several structures, including ABarppaapp; ABarpppapp; dopaminergic neurons; head mesodermal cell; and mechanosensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by twenty chemicals including Tunicamycin; mianserin; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F39E9.2 | |||||
Corresponding_CDS_history | F39E9.2:wp88 | ||||||
Corresponding_transcript | F39E9.2.1 | ||||||
Other_sequence | CR01799 | ||||||
CRC03531_1 | |||||||
Associated_feature | WBsf644049 | ||||||
WBsf220998 | |||||||
Experimental_info | RNAi_result (3) | ||||||
Expr_pattern | Expr1150651 | ||||||
Expr2009665 | |||||||
Expr2027904 | |||||||
Drives_construct | WBCnstr00026708 | ||||||
Construct_product | WBCnstr00026708 | ||||||
Microarray_results (13) | |||||||
Expression_cluster (241) | |||||||
Interaction (155) | |||||||
Map_info | Map | II | Position | -6.84748 | Error | 0.016437 | |
Positive | Positive_clone | F39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00065331 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |