WormBase Tree Display for Gene: WBGene00018195

WBGene00018195 SMap: S_parent: Sequence: F39E9
  Identity: Version: 2
    Name: CGC_name: btb-16 Person_evidence: WBPerson261
      Sequence_name: F39E9.2
      Molecular_name: F39E9.2
        F39E9.2.1
        CE32655
      Other_name: CELE_F39E9.2 Accession_evidence: NDB BX284602
      Public_name: btb-16
    DB_info: Database: AceView gene 2D587
        WormQTL gene WBGene00018195
        WormFlux gene WBGene00018195
        NDB locus_tag CELE_F39E9.2
        Panther gene CAEEL|WormBase=WBGene00018195|UniProtKB=O17112
          family PTHR22744
        NCBI gene 173674
        RefSeq protein NM_062098.6
        TREEFAM TREEFAM_ID TF322195
        TrEMBL UniProtAcc O17112
        UniProt_GCRP UniProtAcc O17112
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 07 Nov 2007 11:51:23 WBPerson2970 Name_change: CGC_name: btb-16
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: btb
    Allele (75)
    RNASeq_FPKM (74)
    Ortholog (152)
    Paralog (29)
    Structured_description: Automated_description: Enriched in several structures, including ABarppaapp; ABarpppapp; dopaminergic neurons; head mesodermal cell; and mechanosensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by twenty chemicals including Tunicamycin; mianserin; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F39E9.2
    Corresponding_CDS_history: F39E9.2:wp88
    Corresponding_transcript: F39E9.2.1
    Other_sequence (2)
    Associated_feature: WBsf644049
      WBsf220998
  Experimental_info: RNAi_result: WBRNAi00046776 Inferred_automatically: RNAi_primary
      WBRNAi00014601 Inferred_automatically: RNAi_primary
      WBRNAi00097119 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1150651
      Expr2009665
      Expr2027904
    Drives_construct: WBCnstr00026708
    Construct_product: WBCnstr00026708
    Microarray_results (13)
    Expression_cluster (241)
    Interaction (155)
  Map_info: Map: II Position: -6.84748 Error: 0.016437
    Positive: Positive_clone: F39E9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene