WormBase Tree Display for Gene: WBGene00018195

WBGene00018195 SMap: S_parent: Sequence: F39E9
  Identity: Version: 2
    Name: CGC_name: btb-16 Person_evidence: WBPerson261
      Sequence_name: F39E9.2
      Molecular_name: F39E9.2
        F39E9.2.1
        CE32655
      Other_name: CELE_F39E9.2 Accession_evidence: NDB BX284602
      Public_name: btb-16
    DB_info: Database: AceView gene 2D587
        WormQTL gene WBGene00018195
        WormFlux gene WBGene00018195
        NDB locus_tag CELE_F39E9.2
        Panther gene CAEEL|WormBase=WBGene00018195|UniProtKB=O17112
          family PTHR22744
        NCBI gene 173674
        RefSeq protein NM_062098.6
        TREEFAM TREEFAM_ID TF322195
        TrEMBL UniProtAcc O17112
        UniProt_GCRP UniProtAcc O17112
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 07 Nov 2007 11:51:23 WBPerson2970 Name_change: CGC_name: btb-16
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: btb
    Allele (75)
    RNASeq_FPKM (74)
    Ortholog (152)
    Paralog (29)
    Structured_description: Automated_description: Enriched in several structures, including ABarppaapp; ABarpppapp; dopaminergic neurons; head mesodermal cell; and mechanosensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by twenty chemicals including Tunicamycin; mianserin; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F39E9.2
    Corresponding_CDS_history: F39E9.2:wp88
    Corresponding_transcript: F39E9.2.1
    Other_sequence: CR01799
      CRC03531_1
    Associated_feature: WBsf644049
      WBsf220998
  Experimental_info: RNAi_result: WBRNAi00046776 Inferred_automatically: RNAi_primary
      WBRNAi00014601 Inferred_automatically: RNAi_primary
      WBRNAi00097119 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1150651
      Expr2009665
      Expr2027904
    Drives_construct: WBCnstr00026708
    Construct_product: WBCnstr00026708
    Microarray_results (13)
    Expression_cluster (241)
    Interaction: WBInteraction000195592
      WBInteraction000204275
      WBInteraction000213364
      WBInteraction000216201
      WBInteraction000220517
      WBInteraction000221934
      WBInteraction000224017
      WBInteraction000224237
      WBInteraction000229237
      WBInteraction000235342
      WBInteraction000238978
      WBInteraction000239772
      WBInteraction000241717
      WBInteraction000242385
      WBInteraction000245364
      WBInteraction000250808
      WBInteraction000250928
      WBInteraction000251030
      WBInteraction000251077
      WBInteraction000255882
      WBInteraction000257418
      WBInteraction000260914
      WBInteraction000262670
      WBInteraction000264136
      WBInteraction000264981
      WBInteraction000266111
      WBInteraction000267112
      WBInteraction000268161
      WBInteraction000268673
      WBInteraction000269902
      WBInteraction000270625
      WBInteraction000271016
      WBInteraction000272398
      WBInteraction000273621
      WBInteraction000274051
      WBInteraction000275036
      WBInteraction000276922
      WBInteraction000277449
      WBInteraction000277548
      WBInteraction000278359
      WBInteraction000282276
      WBInteraction000282505
      WBInteraction000283029
      WBInteraction000283318
      WBInteraction000283337
      WBInteraction000284987
      WBInteraction000287152
      WBInteraction000291717
      WBInteraction000292545
      WBInteraction000293409
      WBInteraction000293416
      WBInteraction000296893
      WBInteraction000297522
      WBInteraction000299217
      WBInteraction000299651
      WBInteraction000300001
      WBInteraction000300286
      WBInteraction000301171
      WBInteraction000301495
      WBInteraction000304252
      WBInteraction000304745
      WBInteraction000304774
      WBInteraction000304793
      WBInteraction000306070
      WBInteraction000306995
      WBInteraction000309545
      WBInteraction000310406
      WBInteraction000311612
      WBInteraction000315390
      WBInteraction000316495
      WBInteraction000321357
      WBInteraction000322831
      WBInteraction000325485
      WBInteraction000327409
      WBInteraction000328111
      WBInteraction000331209
      WBInteraction000331385
      WBInteraction000331932
      WBInteraction000335354
      WBInteraction000345518
      WBInteraction000346233
      WBInteraction000347873
      WBInteraction000351266
      WBInteraction000352156
      WBInteraction000352776
      WBInteraction000352798
      WBInteraction000352876
      WBInteraction000353056
      WBInteraction000353888
      WBInteraction000354398
      WBInteraction000356797
      WBInteraction000360696
      WBInteraction000361519
      WBInteraction000362454
      WBInteraction000363886
      WBInteraction000366424
      WBInteraction000366466
      WBInteraction000366639
      WBInteraction000366793
      WBInteraction000367043
      WBInteraction000367788
      WBInteraction000368706
      WBInteraction000370020
      WBInteraction000370213
      WBInteraction000370287
      WBInteraction000370474
      WBInteraction000372390
      WBInteraction000372566
      WBInteraction000376225
      WBInteraction000377049
      WBInteraction000380275
      WBInteraction000381735
      WBInteraction000382089
      WBInteraction000384921
      WBInteraction000386139
      WBInteraction000387151
      WBInteraction000391140
      WBInteraction000391992
      WBInteraction000392940
      WBInteraction000395373
      WBInteraction000397290
      WBInteraction000399813
      WBInteraction000401888
      WBInteraction000402061
      WBInteraction000402481
      WBInteraction000402915
      WBInteraction000406207
      WBInteraction000406904
      WBInteraction000407012
      WBInteraction000409423
      WBInteraction000409641
      WBInteraction000410860
      WBInteraction000412356
      WBInteraction000416705
      WBInteraction000417588
      WBInteraction000417713
      WBInteraction000419913
      WBInteraction000420157
      WBInteraction000426373
      WBInteraction000426870
      WBInteraction000431079
      WBInteraction000431214
      WBInteraction000431998
      WBInteraction000437946
      WBInteraction000443483
      WBInteraction000443824
      WBInteraction000447401
      WBInteraction000450313
      WBInteraction000457472
      WBInteraction000458141
      WBInteraction000459442
      WBInteraction000459583
      WBInteraction000459584
      WBInteraction000460099
      WBInteraction000561007
  Map_info: Map: II Position: -6.84748 Error: 0.016437
    Positive: Positive_clone: F39E9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene