WormBase Tree Display for Gene: WBGene00018164
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WBGene00018164 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | sup-36 | Paper_evidence | WBPaper00044385 | |||
Person_evidence | WBPerson171 | ||||||
Sequence_name | F38A5.7 | ||||||
Molecular_name | F38A5.7 | ||||||
F38A5.7.1 | |||||||
CE10038 | |||||||
Other_name | CELE_F38A5.7 | Accession_evidence | NDB | BX284604 | |||
Public_name | sup-36 | ||||||
DB_info | Database | AceView | gene | 4H367 | |||
WormQTL | gene | WBGene00018164 | |||||
WormFlux | gene | WBGene00018164 | |||||
NDB | locus_tag | CELE_F38A5.7 | |||||
Panther | gene | CAEEL|WormBase=WBGene00018164|UniProtKB=Q94207 | |||||
family | PTHR37964 | ||||||
NCBI | gene | 177422 | |||||
RefSeq | protein | NM_068614.7 | |||||
TREEFAM | TREEFAM_ID | TF319404 | |||||
TrEMBL | UniProtAcc | Q94207 | |||||
UniProt_GCRP | UniProtAcc | Q94207 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Acquires_merge | WBGene00006341 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | sup | ||||||
Allele (24) | |||||||
Legacy_information | See also e2217, e2218, e2219 | ||||||
[Schnabel et al] recessive suppressor of ts alleles of pha-1 (e2123 and t1001). No other phenotype. NA 36. Linkage group IV, no precise map position. | |||||||
[C.elegansII] e2217 : recessive suppressor of ts alleles of pha-1 (e2123 and t1001). No other phenotype. OA26: e2218, e2219, etc. [Schnabel et al. 1991] | |||||||
Strain | WBStrain00005854 | ||||||
WBStrain00005855 | |||||||
WBStrain00007732 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00087310 | ||||||
00087311 | |||||||
00087312 | |||||||
00087313 | |||||||
00087314 | |||||||
Ortholog (26) | |||||||
Paralog | WBGene00017481 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Involved in embryonic digestive tract development. Expressed in pharynx. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed (2) | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F38A5.7 | |||||
Corresponding_transcript | F38A5.7.1 | ||||||
Other_sequence | CRC02597_1 | ||||||
CR01773 | |||||||
Associated_feature | WBsf646028 | ||||||
WBsf996775 | |||||||
WBsf1017541 | |||||||
WBsf228436 | |||||||
WBsf228437 | |||||||
WBsf228438 | |||||||
Experimental_info | RNAi_result | WBRNAi00014531 | Inferred_automatically | RNAi_primary | |||
WBRNAi00046676 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031944 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr11431 | ||||||
Expr1012092 | |||||||
Expr1037825 | |||||||
Expr1150551 | |||||||
Expr2017131 | |||||||
Expr2035267 | |||||||
Drives_construct | WBCnstr00019676 | ||||||
WBCnstr00026733 | |||||||
Construct_product | WBCnstr00018919 | ||||||
WBCnstr00019035 | |||||||
WBCnstr00026733 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (159) | |||||||
Interaction (71) | |||||||
Map_info | Map | IV | Position | 3.21306 | |||
Positive | Positive_clone | F38A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (11) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |