WormBase Tree Display for Gene: WBGene00018164
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| WBGene00018164 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sup-36 | Paper_evidence | WBPaper00044385 | |||||
| Person_evidence | WBPerson171 | ||||||||
| Sequence_name | F38A5.7 | ||||||||
| Molecular_name | F38A5.7 | ||||||||
| F38A5.7.1 | |||||||||
| CE10038 | |||||||||
| Other_name | CELE_F38A5.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | sup-36 | ||||||||
| DB_info | Database | AceView | gene | 4H367 | |||||
| WormQTL | gene | WBGene00018164 | |||||||
| WormFlux | gene | WBGene00018164 | |||||||
| NDB | locus_tag | CELE_F38A5.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018164|UniProtKB=Q94207 | |||||||
| family | PTHR37964 | ||||||||
| NCBI | gene | 177422 | |||||||
| RefSeq | protein | NM_068614.7 | |||||||
| TREEFAM | TREEFAM_ID | TF319404 | |||||||
| TrEMBL | UniProtAcc | Q94207 | |||||||
| UniProt_GCRP | UniProtAcc | Q94207 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Nov 2013 12:45:12 | WBPerson2970 | Event | Acquires_merge | WBGene00006341 | ||||
| Name_change | CGC_name | sup-36 | |||||||
| Acquires_merge | WBGene00006341 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sup | ||||||||
| Allele (24) | |||||||||
| Legacy_information | See also e2217, e2218, e2219 | ||||||||
| [Schnabel et al] recessive suppressor of ts alleles of pha-1 (e2123 and t1001). No other phenotype. NA 36. Linkage group IV, no precise map position. | |||||||||
| [C.elegansII] e2217 : recessive suppressor of ts alleles of pha-1 (e2123 and t1001). No other phenotype. OA26: e2218, e2219, etc. [Schnabel et al. 1991] | |||||||||
| Strain | WBStrain00005854 | ||||||||
| WBStrain00005855 | |||||||||
| WBStrain00007732 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00087310 | ||||||||
| 00087311 | |||||||||
| 00087312 | |||||||||
| 00087313 | |||||||||
| 00087314 | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00017481 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Involved in embryonic digestive tract development. Expressed in pharynx. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F38A5.7 | |||||||
| Corresponding_transcript | F38A5.7.1 | ||||||||
| Other_sequence | CRC02597_1 | ||||||||
| CR01773 | |||||||||
| Associated_feature | WBsf646028 | ||||||||
| WBsf996775 | |||||||||
| WBsf1017541 | |||||||||
| WBsf228436 | |||||||||
| WBsf228437 | |||||||||
| WBsf228438 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014531 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046676 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031944 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11431 | ||||||||
| Expr1012092 | |||||||||
| Expr1037825 | |||||||||
| Expr1150551 | |||||||||
| Expr2017131 | |||||||||
| Expr2035267 | |||||||||
| Drives_construct | WBCnstr00019676 | ||||||||
| WBCnstr00026733 | |||||||||
| Construct_product | WBCnstr00018919 | ||||||||
| WBCnstr00019035 | |||||||||
| WBCnstr00026733 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (159) | |||||||||
| Interaction (71) | |||||||||
| Map_info | Map | IV | Position | 3.21306 | |||||
| Positive | Positive_clone | F38A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
