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WormBase Tree Display for Gene: WBGene00018060

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Name Class

WBGene00018060SMapS_parentSequenceF35F10
IdentityVersion2
NameCGC_namearrd-18Person_evidenceWBPerson261
WBPerson522
Sequence_nameF35F10.11
Molecular_nameF35F10.11
F35F10.11.1
CE09936
Other_nameCELE_F35F10.11Accession_evidenceNDBBX284605
Public_namearrd-18
DB_infoDatabaseAceViewgene5D790
WormQTLgeneWBGene00018060
WormFluxgeneWBGene00018060
NDBlocus_tagCELE_F35F10.11
PanthergeneCAEEL|WormBase=WBGene00018060|UniProtKB=Q9GYT5
familyPTHR11188
NCBIgene178763
RefSeqproteinNM_071515.5
TrEMBLUniProtAccQ9GYT5
UniProt_GCRPUniProtAccQ9GYT5
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
219 Jul 2010 16:45:42WBPerson2970Name_changeCGC_namearrd-18
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classarrd
Allele (66)
RNASeq_FPKM (74)
GO_annotation00092980
00092981
OrthologWBGene00135027Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00131126Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00057560Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00099851Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00150178Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00039624Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039625Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g12639Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g18958Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g5116Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g5117Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g5118Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16900Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g16901Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17243Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20497Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9003Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g14815Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g20621Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5529Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g5530Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00113.g4709Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g6625Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6626Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6627Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold586.g4908Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00126.g5026Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00129.g5128Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00129.g5129Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06833Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_10867Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005823Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04013Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_20074900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g13707Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00057559Caenorhabditis remaneiFrom_analysisWormBase-Compara
SGD:S000001918Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
SGD:S000000197Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
SGD:S000003013Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
SGD:S000003620Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
SGD:S000001729Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
SGD:S000005544Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
SGD:S000005849Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
SGD:S000006234Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
FB:FBgn0037465Drosophila melanogasterFrom_analysisHieranoid
OMA
OrthoFinder
OrthoInspector
Panther
FB:FBgn0037517Drosophila melanogasterFrom_analysisHieranoid
OMA
OrthoFinder
OrthoInspector
Panther
FB:FBgn0037521Drosophila melanogasterFrom_analysisHieranoid
OrthoFinder
OrthoInspector
Panther
FB:FBgn0037853Drosophila melanogasterFrom_analysisOMA
OrthoFinder
Panther
FB:FBgn0042102Drosophila melanogasterFrom_analysisHieranoid
OMA
OrthoFinder
OrthoInspector
Panther
FB:FBgn0042103Drosophila melanogasterFrom_analysisHieranoid
OMA
OrthoFinder
OrthoInspector
Panther
FB:FBgn0042104Drosophila melanogasterFrom_analysisHieranoid
OMA
OrthoFinder
OrthoInspector
Panther
FB:FBgn0042105Drosophila melanogasterFrom_analysisHieranoid
OrthoFinder
OrthoInspector
Panther
ZFIN:ZDB-GENE-030131-7146Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-050417-447Danio rerioFrom_analysisEnsEMBL-Compara
OMA
OrthoInspector
ZFIN:ZDB-GENE-030925-15Danio rerioFrom_analysisEnsEMBL-Compara
OMA
Panther
HGNC:25225Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoInspector
MGI:1918057Mus musculusFrom_analysisEnsEMBL-Compara
Inparanoid
SonicParanoid
MGI:2446136Mus musculusFrom_analysisEnsEMBL-Compara
OMA
Panther
RGD:1311763Rattus norvegicusFrom_analysisEnsEMBL-Compara
SonicParanoid
Paralog (29)
Structured_descriptionAutomated_descriptionPredicted to be involved in protein transport. Predicted to be located in cytoplasm. Is an ortholog of human ARRDC2 (arrestin domain containing 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF35F10.11
Corresponding_transcriptF35F10.11.1
Other_sequenceCR01530
CRC02889_1
Associated_featureWBsf999598
WBsf233475
Experimental_infoRNAi_resultWBRNAi00031792Inferred_automaticallyRNAi_primary
WBRNAi00046368Inferred_automaticallyRNAi_primary
WBRNAi00014350Inferred_automaticallyRNAi_primary
Expr_patternExpr1012915
Expr1037781
Expr1150249
Expr2009417
Expr2027653
Drives_constructWBCnstr00026808
Construct_productWBCnstr00026808
Microarray_resultsSMD_F35F10.11
186793_at
A_12_P108526
Aff_F35F10.11
GPL14144_F35F10.11_1230-1289_0.971_1_A
GPL19516_CGZ0019776
GPL21109_F35F10.11
GPL3518_CE09936
GPL8304_CE_WBGene00018060_A
GPL8673_F35F10_11P00607
GPL8673_F35F10_11P00621
GPL8673_F35F10_11P01093
GPL9450_F35F10.11
cea2.p.158080
Expression_cluster (119)
InteractionWBInteraction000203020
WBInteraction000224960
WBInteraction000434247
WBInteraction000581041
Map_infoMapVPosition-12.1963Error0.012694
PositivePositive_cloneF35F10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene