WormBase Tree Display for Gene: WBGene00017998
expand all nodes | collapse all nodes | view schema
WBGene00017998 | SMap | S_parent | Sequence | F33D4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F33D4.6 | |||||||
Molecular_name | F33D4.6a | ||||||||
F33D4.6a.1 | |||||||||
CE33634 | |||||||||
F33D4.6b | |||||||||
CE37228 | |||||||||
F33D4.6c | |||||||||
CE17037 | |||||||||
F33D4.6b.1 | |||||||||
F33D4.6c.1 | |||||||||
Other_name | CELE_F33D4.6 | Accession_evidence | NDB | BX284604 | |||||
Public_name | F33D4.6 | ||||||||
DB_info | Database | AceView | gene | 4I480 | |||||
WormQTL | gene | WBGene00017998 | |||||||
WormFlux | gene | WBGene00017998 | |||||||
NDB | locus_tag | CELE_F33D4.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017998|UniProtKB=W6RRY4 | |||||||
family | PTHR37435 | ||||||||
NCBI | gene | 177552 | |||||||
RefSeq | protein | NM_001307241.3 | |||||||
NM_068860.2 | |||||||||
NM_068859.6 | |||||||||
TREEFAM | TREEFAM_ID | TF320147 | |||||||
TrEMBL | UniProtAcc | O44189 | |||||||
W6RRY4 | |||||||||
H2KYK9 | |||||||||
UniProt_GCRP | UniProtAcc | W6RRY4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele | WBVar00429222 | ||||||||
WBVar01500079 | |||||||||
WBVar00429223 | |||||||||
WBVar00429224 | |||||||||
WBVar00922866 | |||||||||
WBVar00429225 | |||||||||
WBVar00922867 | |||||||||
WBVar00429226 | |||||||||
WBVar00922868 | |||||||||
WBVar00429227 | |||||||||
WBVar00922869 | |||||||||
WBVar00429228 | |||||||||
WBVar00429229 | |||||||||
WBVar00922870 | |||||||||
WBVar00429230 | |||||||||
WBVar00922871 | |||||||||
WBVar00922872 | |||||||||
WBVar00429231 | |||||||||
WBVar00922873 | |||||||||
WBVar00922874 | |||||||||
WBVar00922875 | |||||||||
WBVar00922876 | |||||||||
WBVar00922877 | |||||||||
WBVar00922878 | |||||||||
WBVar00922879 | |||||||||
WBVar00922880 | |||||||||
WBVar00922881 | |||||||||
WBVar00922882 | |||||||||
WBVar00922883 | |||||||||
WBVar00922884 | |||||||||
WBVar00922885 | |||||||||
WBVar00922886 | |||||||||
WBVar00922887 | |||||||||
WBVar00922888 | |||||||||
WBVar00922889 | |||||||||
WBVar00922890 | |||||||||
WBVar01499395 | |||||||||
WBVar01499396 | |||||||||
WBVar02151493 | |||||||||
WBVar00190820 | |||||||||
WBVar01966636 | |||||||||
WBVar01499633 | |||||||||
WBVar02003869 | |||||||||
WBVar01772253 | |||||||||
WBVar01453157 | |||||||||
WBVar01500245 | |||||||||
WBVar02156484 | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (21) | |||||||||
Paralog | WBGene00001068 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00008511 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00017307 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00017420 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021326 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in several structures, including CEP socket cell; arc ant V; germline precursor cell; hypodermis; and mechanosensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by twenty-eight chemicals including Ethanol; Nitric Oxide; and methylmercury hydroxide based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F33D4.6a | |||||||
F33D4.6b | |||||||||
F33D4.6c | |||||||||
Corresponding_CDS_history | F33D4.6a:wp96 | ||||||||
F33D4.6b:wp129 | |||||||||
Corresponding_transcript | F33D4.6a.1 | ||||||||
F33D4.6b.1 | |||||||||
F33D4.6c.1 | |||||||||
Other_sequence (15) | |||||||||
Associated_feature | WBsf668047 | ||||||||
WBsf997039 | |||||||||
WBsf997040 | |||||||||
WBsf1017758 | |||||||||
WBsf230313 | |||||||||
WBsf230314 | |||||||||
Experimental_info | RNAi_result (14) | ||||||||
Expr_pattern | Expr1016508 | ||||||||
Expr1037752 | |||||||||
Expr1150094 | |||||||||
Expr2003256 | |||||||||
Expr2021470 | |||||||||
Drives_construct | WBCnstr00026853 | ||||||||
Construct_product | WBCnstr00026853 | ||||||||
Microarray_results (29) | |||||||||
Expression_cluster (278) | |||||||||
Interaction | WBInteraction000030403 | ||||||||
WBInteraction000032453 | |||||||||
WBInteraction000553059 | |||||||||
WBInteraction000568636 | |||||||||
Map_info | Positive | Positive_clone | F33D4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 3.44277 | |||||||
Reference | WBPaper00064942 | ||||||||
Method | Gene |