WormBase Tree Display for Gene: WBGene00017967
expand all nodes | collapse all nodes | view schema
| WBGene00017967 | SMap | S_parent | Sequence | F32A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ada-2 | |||||||
| Sequence_name | F32A5.1 | ||||||||
| Molecular_name | F32A5.1a | ||||||||
| F32A5.1a.1 | |||||||||
| CE28287 | |||||||||
| F32A5.1b | |||||||||
| CE37767 | |||||||||
| F32A5.1b.1 | |||||||||
| Other_name | CELE_F32A5.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | ada-2 | ||||||||
| DB_info | Database | AceView | gene | 2H545 | |||||
| WormQTL | gene | WBGene00017967 | |||||||
| WormFlux | gene | WBGene00017967 | |||||||
| NDB | locus_tag | CELE_F32A5.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017967|UniProtKB=Q19953 | |||||||
| family | PTHR12374 | ||||||||
| NCBI | gene | 174194 | |||||||
| RefSeq | protein | NM_001026963.5 | |||||||
| NM_001026962.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF313975 | |||||||
| TrEMBL | UniProtAcc | Q5DX44 | |||||||
| Q19953 | |||||||||
| UniProt_GCRP | UniProtAcc | Q19953 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 15 Sep 2004 14:20:09 | WBPerson1971 | Name_change | CGC_name | ada-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ada | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00037541 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00066417 | ||||||||
| 00066418 | |||||||||
| 00066419 | |||||||||
| 00066420 | |||||||||
| 00066421 | |||||||||
| 00066422 | |||||||||
| 00066423 | |||||||||
| Ortholog (30) | |||||||||
| Structured_description | Automated_description | Predicted to enable chromatin binding activity and transcription coactivator activity. Predicted to be involved in chromatin remodeling and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of SAGA-type complex. Is an ortholog of human TADA2B (transcriptional adaptor 2B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F32A5.1a | |||||||
| F32A5.1b | |||||||||
| Corresponding_CDS_history | F32A5.1:wp135 | ||||||||
| Corresponding_transcript | F32A5.1a.1 | ||||||||
| F32A5.1b.1 | |||||||||
| Other_sequence (65) | |||||||||
| Associated_feature | WBsf644366 | ||||||||
| WBsf644367 | |||||||||
| WBsf644368 | |||||||||
| WBsf644369 | |||||||||
| WBsf657810 | |||||||||
| WBsf657811 | |||||||||
| WBsf988383 | |||||||||
| Transcription_factor | WBTranscriptionFactor001135 | ||||||||
| Experimental_info | RNAi_result (40) | ||||||||
| Expr_pattern | Expr1028102 | ||||||||
| Expr1037728 | |||||||||
| Expr1149963 | |||||||||
| Expr2009231 | |||||||||
| Expr2027468 | |||||||||
| Drives_construct | WBCnstr00026879 | ||||||||
| Construct_product | WBCnstr00026879 | ||||||||
| WBCnstr00038821 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (87) | |||||||||
| Interaction (147) | |||||||||
| Map_info | Map | II | Position | 0.500024 | Error | 4.7e-05 | |||
| Positive | Positive_clone | F32A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026636 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040863 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
