WormBase Tree Display for Gene: WBGene00017926
expand all nodes | collapse all nodes | view schema
| WBGene00017926 | SMap | S_parent | Sequence | F29C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cox-6C | Person_evidence | WBPerson117 | |||||
| WBPerson7169 | |||||||||
| Sequence_name | F29C4.2 | ||||||||
| Molecular_name | F29C4.2 | ||||||||
| F29C4.2.1 | |||||||||
| CE17720 | |||||||||
| Other_name | CELE_F29C4.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | cox-6C | ||||||||
| DB_info | Database | AceView | gene | 4A881 | |||||
| WormQTL | gene | WBGene00017926 | |||||||
| WormFlux | gene | WBGene00017926 | |||||||
| NDB | locus_tag | CELE_F29C4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017926|UniProtKB=O76367 | |||||||
| family | PTHR12916 | ||||||||
| NCBI | gene | 176828 | |||||||
| RefSeq | protein | NM_067466.7 | |||||||
| TREEFAM | TREEFAM_ID | TF353620 | |||||||
| TrEMBL | UniProtAcc | O76367 | |||||||
| UniProt_GCRP | UniProtAcc | O76367 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Sep 2017 13:25:30 | WBPerson2970 | Name_change | CGC_name | cox-6C | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cox | ||||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00038254 | ||||||||
| 00038255 | |||||||||
| 00038256 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00013728 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00044290 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be located in mitochondrial inner membrane. Expressed in several structures, including body wall musculature; coelomocyte; pharynx; spermatheca; and vulva. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F29C4.2 | |||||||
| Corresponding_transcript | F29C4.2.1 | ||||||||
| Other_sequence (54) | |||||||||
| Associated_feature | WBsf645736 | ||||||||
| WBsf659858 | |||||||||
| WBsf995068 | |||||||||
| WBsf995069 | |||||||||
| WBsf1016489 | |||||||||
| WBsf1016490 | |||||||||
| WBsf227802 | |||||||||
| Experimental_info | RNAi_result (26) | ||||||||
| Expr_pattern | Expr13591 | ||||||||
| Expr1010749 | |||||||||
| Expr1037710 | |||||||||
| Expr1149816 | |||||||||
| Expr2003139 | |||||||||
| Expr2021352 | |||||||||
| Drives_construct | WBCnstr00026909 | ||||||||
| Construct_product | WBCnstr00026909 | ||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction (34) | |||||||||
| Map_info | Map | IV | Position | -26.9276 | |||||
| Positive | Positive_clone | F29C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031194 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
