WormBase Tree Display for Gene: WBGene00017913
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WBGene00017913 | SMap | S_parent | Sequence | F29A7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F29A7.3 | |||||||
Molecular_name | F29A7.3 | ||||||||
F29A7.3.1 | |||||||||
CE35512 | |||||||||
Other_name | CELE_F29A7.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | F29A7.3 | ||||||||
DB_info | Database | AceView | gene | 2D43 | |||||
WormQTL | gene | WBGene00017913 | |||||||
WormFlux | gene | WBGene00017913 | |||||||
NDB | locus_tag | CELE_F29A7.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017913|UniProtKB=O16208 | |||||||
family | PTHR47629 | ||||||||
NCBI | gene | 185103 | |||||||
RefSeq | protein | NM_061949.4 | |||||||
TREEFAM | TREEFAM_ID | TF343421 | |||||||
TrEMBL | UniProtAcc | O16208 | |||||||
UniProt_GCRP | UniProtAcc | O16208 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (22) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00159545 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
CSP31.g20186 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP31.g20188 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP31.g23261 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP31.g23262 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g3772 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (115) | |||||||||
Structured_description | Automated_description | Enriched in NSM and neurons based on tiling array and RNA-seq studies. Is affected by several genes including eat-2; hda-1; and set-2 based on tiling array and RNA-seq studies. Is affected by five chemicals including metformin; Psoralens; and allantoin based on RNA-seq studies. Is predicted to encode a protein with the following domains: PAN-like domain and PAN-3 domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F29A7.3 | |||||||
Corresponding_CDS_history | F29A7.3:wp107 | ||||||||
Corresponding_transcript | F29A7.3.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00022344 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031557 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045889 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028103 | ||||||||
Expr1149793 | |||||||||
Drives_construct | WBCnstr00026922 | ||||||||
Construct_product | WBCnstr00026922 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (34) | |||||||||
Interaction | WBInteraction000544151 | ||||||||
Map_info | Positive | Positive_clone | F29A7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -11.7887 | |||||||
Method | Gene |