WormBase Tree Display for Gene: WBGene00017896
expand all nodes | collapse all nodes | view schema
| WBGene00017896 | SMap | S_parent | Sequence | F28C10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F28C10.1 | |||||||
| Molecular_name | F28C10.1 | ||||||||
| F28C10.1.1 | |||||||||
| CE07154 | |||||||||
| Other_name | CELE_F28C10.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F28C10.1 | ||||||||
| DB_info | Database | AceView | gene | XB163 | |||||
| WormQTL | gene | WBGene00017896 | |||||||
| WormFlux | gene | WBGene00017896 | |||||||
| NDB | locus_tag | CELE_F28C10.1 | |||||||
| NCBI | gene | 185050 | |||||||
| RefSeq | protein | NM_075716.1 | |||||||
| TrEMBL | UniProtAcc | Q19861 | |||||||
| UniProt_GCRP | UniProtAcc | Q19861 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00060272 | Caenorhabditis remanei | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Csp11.Scaffold630.g18152 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| FL83_03240 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_022168 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g18292 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in AVEL; AVER; and coelomocyte based on tiling array and single-cell RNA-seq studies. Is affected by several genes including eat-2; lin-15B; and met-2 based on microarray and RNA-seq studies. Is affected by six chemicals including metformin; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28C10.1 | |||||||
| Corresponding_transcript | F28C10.1.1 | ||||||||
| Associated_feature | WBsf1003802 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00031514 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045801 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014035 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027032 | ||||||||
| Expr1149713 | |||||||||
| Expr2003096 | |||||||||
| Expr2021310 | |||||||||
| Drives_construct | WBCnstr00026933 | ||||||||
| Construct_product | WBCnstr00026933 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (30) | |||||||||
| Interaction | WBInteraction000170618 | ||||||||
| WBInteraction000267792 | |||||||||
| WBInteraction000301385 | |||||||||
| WBInteraction000352899 | |||||||||
| WBInteraction000402977 | |||||||||
| WBInteraction000434360 | |||||||||
| WBInteraction000438229 | |||||||||
| WBInteraction000452872 | |||||||||
| Map_info | Positive | Positive_clone | F28C10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -19.685 | |||||||
| Method | Gene |
