WormBase Tree Display for Gene: WBGene00017789
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| WBGene00017789 | SMap | S_parent | Sequence | F25E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F25E5.8 | |||||||
| Molecular_name | F25E5.8a | ||||||||
| F25E5.8a.1 | |||||||||
| CE07142 | |||||||||
| F25E5.8b | |||||||||
| CE32876 | |||||||||
| F25E5.8b.1 | |||||||||
| Other_name | CELE_F25E5.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F25E5.8 | ||||||||
| DB_info | Database | AceView | gene | 5H917 | |||||
| WormQTL | gene | WBGene00017789 | |||||||
| WormFlux | gene | WBGene00017789 | |||||||
| NDB | locus_tag | CELE_F25E5.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017789|UniProtKB=H2KYV5 | |||||||
| family | PTHR37440 | ||||||||
| NCBI | gene | 184927 | |||||||
| RefSeq | protein | NM_072508.7 | |||||||
| NM_001380691.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF315702 | |||||||
| TrEMBL | UniProtAcc | H2KYV5 | |||||||
| Q8IA55 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KYV5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog | WBGene00007183 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00007439 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013753 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00077692 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in several structures, including AVA; G2; W cell; intestine; and mechanosensory neurons based on microarray; tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by nineteen chemicals including diallyl trisulfide; Ethanol; and methylmercuric chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F25E5.8a | |||||||
| F25E5.8b | |||||||||
| Corresponding_transcript | F25E5.8a.1 | ||||||||
| F25E5.8b.1 | |||||||||
| Other_sequence | CSC01038_1 | ||||||||
| FD516415.1 | |||||||||
| CRC08501_1 | |||||||||
| CBC02527_1 | |||||||||
| FD517433.1 | |||||||||
| CJC07245_1 | |||||||||
| Associated_feature | WBsf646940 | ||||||||
| WBsf646941 | |||||||||
| WBsf646942 | |||||||||
| WBsf231977 | |||||||||
| WBsf231978 | |||||||||
| WBsf231979 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013877 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045511 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031379 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016327 | ||||||||
| Expr1037643 | |||||||||
| Expr1149431 | |||||||||
| Expr2002964 | |||||||||
| Expr2021180 | |||||||||
| Drives_construct | WBCnstr00027014 | ||||||||
| Construct_product | WBCnstr00027014 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (213) | |||||||||
| Interaction (148) | |||||||||
| Map_info | Positive | Positive_clone | F25E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.750336 | |||||||
| Reference | WBPaper00065331 | ||||||||
| Method | Gene |
