WormBase Tree Display for Gene: WBGene00017776
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| WBGene00017776 | SMap | S_parent | Sequence | F25B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F25B5.5 | |||||||
| Molecular_name | F25B5.5 | ||||||||
| F25B5.5.1 | |||||||||
| CE01922 | |||||||||
| Other_name | CELE_F25B5.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | F25B5.5 | ||||||||
| DB_info | Database | AceView | gene | 3H34 | |||||
| WormQTL | gene | WBGene00017776 | |||||||
| WormFlux | gene | WBGene00017776 | |||||||
| NDB | locus_tag | CELE_F25B5.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017776|UniProtKB=Q09316 | |||||||
| family | PTHR43020 | ||||||||
| NCBI | gene | 175841 | |||||||
| RefSeq | protein | NM_065889.8 | |||||||
| SwissProt | UniProtAcc | Q09316 | |||||||
| TREEFAM | TREEFAM_ID | TF101033 | |||||||
| UniProt_GCRP | UniProtAcc | Q09316 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Contained_in_operon | CEOP3352 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00022363 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable N6-isopentenyladenosine methylthiotransferase activity. Predicted to be involved in tRNA methylthiolation. Predicted to be located in cytosol and mitochondrion. Is an ortholog of human CDK5RAP1 (CDK5 regulatory subunit associated protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F25B5.5 | |||||||
| Corresponding_transcript | F25B5.5.1 | ||||||||
| Other_sequence | Dviv_isotig13855 | ||||||||
| FC554882.1 | |||||||||
| Tcir_isotig02821 | |||||||||
| Dviv_isotig13858 | |||||||||
| EX555221.1 | |||||||||
| TSC07094_1 | |||||||||
| ES561855.1 | |||||||||
| CR09954 | |||||||||
| BMC09405_1 | |||||||||
| MH00073 | |||||||||
| Dviv_isotig13857 | |||||||||
| MHC08213_1 | |||||||||
| CRC09434_1 | |||||||||
| FC546534.1 | |||||||||
| Tcir_isotig02822 | |||||||||
| ES562797.1 | |||||||||
| ACC38318_1 | |||||||||
| Dviv_isotig13856 | |||||||||
| ACC16986_1 | |||||||||
| EX559855.1 | |||||||||
| FC541697.1 | |||||||||
| EX560455.1 | |||||||||
| MH02445 | |||||||||
| CRC09019_1 | |||||||||
| EX556003.1 | |||||||||
| Acan_isotig07594 | |||||||||
| EX502921.1 | |||||||||
| JI168729.1 | |||||||||
| EW741332.1 | |||||||||
| EX499894.1 | |||||||||
| Associated_feature | WBsf226740 | ||||||||
| WBsf226741 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031357 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013854 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103309 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005332 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045477 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024765 | ||||||||
| Expr1037639 | |||||||||
| Expr1149396 | |||||||||
| Expr2002948 | |||||||||
| Expr2021164 | |||||||||
| Drives_construct | WBCnstr00027027 | ||||||||
| Construct_product | WBCnstr00027027 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction (34) | |||||||||
| Map_info | Positive | Positive_clone | F25B5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.4305 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
