WormBase Tree Display for Gene: WBGene00017772
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| WBGene00017772 | SMap | S_parent | Sequence | F25B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F25B4.9 | ||||||||
| Molecular_name | F25B4.9 | ||||||||
| F25B4.9.1 | |||||||||
| CE09627 | |||||||||
| Other_name | CELE_F25B4.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-1 | ||||||||
| DB_info | Database | AceView | gene | 5G181 | |||||
| WormQTL | gene | WBGene00017772 | |||||||
| WormFlux | gene | WBGene00017772 | |||||||
| NDB | locus_tag | CELE_F25B4.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017772|UniProtKB=Q22966 | |||||||
| family | PTHR22802 | ||||||||
| NCBI | gene | 178958 | |||||||
| RefSeq | protein | NM_072099.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315317 | |||||||
| TrEMBL | UniProtAcc | Q22966 | |||||||
| UniProt_GCRP | UniProtAcc | Q22966 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Nov 2004 10:39:15 | WBPerson2970 | Name_change | CGC_name | clec-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00076854 | ||||||||
| 00076855 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Automated_description | Predicted to enable carbohydrate binding activity. Predicted to be located in external side of plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F25B4.9 | |||||||
| Corresponding_transcript | F25B4.9.1 | ||||||||
| Other_sequence | EX541548.1 | ||||||||
| EX542840.1 | |||||||||
| ACC05098_1 | |||||||||
| Acan_isotig10155 | |||||||||
| EX541125.1 | |||||||||
| EX562873.1 | |||||||||
| Tcol_isotig03807 | |||||||||
| EX548224.1 | |||||||||
| EX544014.1 | |||||||||
| FD516502.1 | |||||||||
| EX547738.1 | |||||||||
| HBC25519_1 | |||||||||
| CRC02021_1 | |||||||||
| EX543541.1 | |||||||||
| EX562647.1 | |||||||||
| EX550363.1 | |||||||||
| CJC01609_1 | |||||||||
| AE00817 | |||||||||
| FD515056.1 | |||||||||
| BM052064.1 | |||||||||
| CBC05917_1 | |||||||||
| EX540122.1 | |||||||||
| CB037894.1 | |||||||||
| ACC04193_1 | |||||||||
| AE03420 | |||||||||
| EW743470.1 | |||||||||
| Hbac_isotig03268 | |||||||||
| Tcol_isotig03808 | |||||||||
| BUC00907_1 | |||||||||
| Tcir_isotig28694 | |||||||||
| EX540626.1 | |||||||||
| EX541841.1 | |||||||||
| EX537923.1 | |||||||||
| EX536393.1 | |||||||||
| Dviv_isotig25447 | |||||||||
| Tcir_isotig07869 | |||||||||
| FD514710.1 | |||||||||
| OOC00900_1 | |||||||||
| AYC02193_1 | |||||||||
| EX542821.1 | |||||||||
| EX547543.1 | |||||||||
| CR01432 | |||||||||
| CSC01562_1 | |||||||||
| ACC37738_1 | |||||||||
| EX540077.1 | |||||||||
| CB038993.1 | |||||||||
| EX536028.1 | |||||||||
| EX913558.1 | |||||||||
| EX537981.1 | |||||||||
| Oden_isotig20094 | |||||||||
| TDC00572_1 | |||||||||
| Associated_feature | WBsf661004 | ||||||||
| WBsf716813 | |||||||||
| WBsf1000066 | |||||||||
| WBsf1000067 | |||||||||
| WBsf1000068 | |||||||||
| WBsf1019672 | |||||||||
| WBsf1019673 | |||||||||
| WBsf1019674 | |||||||||
| WBsf1019675 | |||||||||
| WBsf231788 | |||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr1016205 | ||||||||
| Expr1037635 | |||||||||
| Expr1149391 | |||||||||
| Expr2010113 | |||||||||
| Expr2028356 | |||||||||
| Drives_construct | WBCnstr00027031 | ||||||||
| Construct_product | WBCnstr00027031 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (230) | |||||||||
| Interaction (167) | |||||||||
| Map_info | Map | V | Position | -1.19989 | Error | 0.020934 | |||
| Positive | Positive_clone | F25B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4505 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030297 | ||||||||
| WBPaper00041082 | |||||||||
| WBPaper00061662 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
